Miyakogusa Predicted Gene
- Lj0g3v0283089.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0283089.1 Non Chatacterized Hit- tr|I1LMF8|I1LMF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50614
PE,73.24,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Homeodomain-like,Homeodomain-like; no description,H,CUFF.18868.1
(2004 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70484 similar to UniRef100_A7PIT5 Cluster: Chromosome... 1203 0.0
gnl|LJGI|BP081473 147 3e-34
gnl|LJGI|TC60798 similar to UniRef100_A7PNN7 Cluster: Chromosome... 115 1e-24
gnl|LJGI|TC73711 similar to UniRef100_A7NYY2 Cluster: Chromosome... 111 2e-23
gnl|LJGI|BP066400 similar to UniRef100_A7NYY2 Cluster: Chromosom... 70 6e-11
>gnl|LJGI|TC70484 similar to UniRef100_A7PIT5 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 782
Score = 1203 bits (607), Expect = 0.0
Identities = 607/607 (100%)
Strand = Plus / Plus
Query: 1398 cgaacctattgggtcccccgaaactcctgtcctagattcagggattactggtaccttact 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgaacctattgggtcccccgaaactcctgtcctagattcagggattactggtaccttact 61
Query: 1458 tgacccgtccttgctgacaaatccgagcaacctagttgaaagtaaccatgagtccacttc 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgacccgtccttgctgacaaatccgagcaacctagttgaaagtaaccatgagtccacttc 121
Query: 1518 ttcccccactgacacaacagttgacaatataacaccagattccagagcgatagttgccgt 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttcccccactgacacaacagttgacaatataacaccagattccagagcgatagttgccgt 181
Query: 1578 tccaactagtgctgaagcattagctgtggttcctgcaagtcagaagaccaagcgcgctga 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tccaactagtgctgaagcattagctgtggttcctgcaagtcagaagaccaagcgcgctga 241
Query: 1638 ttatgcacagcgtcggaccaggaggccatttactgtgtatgaggtagaagcacttgttca 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttatgcacagcgtcggaccaggaggccatttactgtgtatgaggtagaagcacttgttca 301
Query: 1698 cgcagttgaagaacttggaactggaaggtggcgtgatgttaagttgcgatcttttgagaa 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgcagttgaagaacttggaactggaaggtggcgtgatgttaagttgcgatcttttgagaa 361
Query: 1758 tgcagaccacaggacttatgtagacttaaaggataaatggaagacattagtgcacactgc 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgcagaccacaggacttatgtagacttaaaggataaatggaagacattagtgcacactgc 421
Query: 1818 aagcatctcccctcaacaaaggagaggagagccagtaccccaggagctattagatagggt 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagcatctcccctcaacaaaggagaggagagccagtaccccaggagctattagatagggt 481
Query: 1878 tttggcggcacactcttactggtctcagcaccaagccaagcaacatggcaagccccaagt 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttggcggcacactcttactggtctcagcaccaagccaagcaacatggcaagccccaagt 541
Query: 1938 tggacctggcaccttgaagattgcagaagctgcacctgaaagatcatgtttgttgaaggt 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tggacctggcaccttgaagattgcagaagctgcacctgaaagatcatgtttgttgaaggt 601
Query: 1998 gtagaaa 2004
|||||||
Sbjct: 602 gtagaaa 608
>gnl|LJGI|BP081473
Length = 378
Score = 147 bits (74), Expect = 3e-34
Identities = 77/78 (98%)
Strand = Plus / Minus
Query: 1927 aagccccaagttggacctggcaccttgaagattgcagaagctgcacctgaaagatcatgt 1986
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagccccaagttgaacctggcaccttgaagattgcagaagctgcacctgaaagatcatgt 319
Query: 1987 ttgttgaaggtgtagaaa 2004
||||||||||||||||||
Sbjct: 318 ttgttgaaggtgtagaaa 301
>gnl|LJGI|TC60798 similar to UniRef100_A7PNN7 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 834
Score = 115 bits (58), Expect = 1e-24
Identities = 151/182 (82%)
Strand = Plus / Plus
Query: 1684 gaagcacttgttcacgcagttgaagaacttggaactggaaggtggcgtgatgttaagttg 1743
|||||| | ||||| || ||||| |||||||||||||||||||||||||||| ||
Sbjct: 319 gaagcattggttcaagccgttgagaaacttggaactggaaggtggcgtgatgtcaaacaa 378
Query: 1744 cgatcttttgagaatgcagaccacaggacttatgtagacttaaaggataaatggaagaca 1803
|| | ||||| |||||| | || | |||||||| || ||||||||||| |||||||||
Sbjct: 379 cgtgcgtttgacaatgcaaagcatcgaacttatgtggatttaaaggataagtggaagaca 438
Query: 1804 ttagtgcacactgcaagcatctcccctcaacaaaggagaggagagccagtaccccaggag 1863
|| |||||||| ||||| ||||||||||| |||||||||||||| || || || ||||||
Sbjct: 439 ttggtgcacacagcaagaatctcccctcagcaaaggagaggagaacctgttcctcaggag 498
Query: 1864 ct 1865
||
Sbjct: 499 ct 500
>gnl|LJGI|TC73711 similar to UniRef100_A7NYY2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 861
Score = 111 bits (56), Expect = 2e-23
Identities = 164/200 (82%)
Strand = Plus / Plus
Query: 1660 aggccatttactgtgtatgaggtagaagcacttgttcacgcagttgaagaacttggaact 1719
||||| ||| ||||| ||| ||||||||||| ||||| ||||| || ||||| |||| |
Sbjct: 346 aggcctttttctgtgggtgaagtagaagcactggttcaagcagtcgaggaactgggaatt 405
Query: 1720 ggaaggtggcgtgatgttaagttgcgatcttttgagaatgcagaccacaggacttatgta 1779
||||||||||| |||||||| | | ||||||| |||||||| || |||| |||||
Sbjct: 406 ggaaggtggcgggatgttaaacttcttgcttttgaaaatgcagagcatcggacatatgtg 465
Query: 1780 gacttaaaggataaatggaagacattagtgcacactgcaagcatctcccctcaacaaagg 1839
|| || ||||| |||||||| ||| | |||||||| ||||| || |||||||| ||||||
Sbjct: 466 gatttgaaggacaaatggaaaacactggtgcacacggcaagaatatcccctcagcaaagg 525
Query: 1840 agaggagagccagtacccca 1859
||||||||||| || |||||
Sbjct: 526 agaggagagcctgttcccca 545
>gnl|LJGI|BP066400 similar to UniRef100_A7NYY2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 462
Score = 69.9 bits (35), Expect = 6e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 1787 aggataaatggaagacattagtgcacactgcaagcatctcccctcaacaaaggagaggag 1846
||||||| ||||||||||| |||||||| || || ||||||||||| | |||||||||||
Sbjct: 385 aggataagtggaagacattggtgcacacagccagaatctcccctcagccaaggagaggag 326
Query: 1847 agccagtaccccaggagct 1865
| || || || ||||||||
Sbjct: 325 aacctgttcctcaggagct 307