Miyakogusa Predicted Gene
- Lj0g3v0282959.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0282959.1 Non Chatacterized Hit- tr|I3SP62|I3SP62_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.6,0,RING/U-box,NULL; ZF_RING_1,Zinc finger, RING-type,
conserved site; seg,NULL; RNF5,NULL; Ring finger,,CUFF.18840.1
(749 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58364 1453 0.0
gnl|LJGI|TC58834 similar to UniRef100_Q6R567 Cluster: Ring domai... 74 1e-12
gnl|LJGI|TC79154 similar to UniRef100_Q6R567 Cluster: Ring domai... 54 1e-06
gnl|LJGI|TC75097 similar to UniRef100_Q6R567 Cluster: Ring domai... 54 1e-06
>gnl|LJGI|TC58364
Length = 1277
Score = 1453 bits (733), Expect = 0.0
Identities = 746/749 (99%), Gaps = 1/749 (0%)
Strand = Plus / Plus
Query: 1 atggaatcaacatacttcgattctaatggggaagtctcaccgaaacaaaaattgaaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atggaatcaacatacttcgattctaatggggaagtctcaccgaaacaaaaattgaaatcc 265
Query: 61 acttcagcagagtcaccaatctccagtagtgacaatggttgttttgattgcaatatttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acttcagcagagtcaccaatctccagtagtgacaatggttgttttgattgcaatatttgc 325
Query: 121 ttggaatcagcgcatgatcctgtggtcacgctatgcggtcatctgtactgctggccatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttggaatcagcgcatgatcctgtggtcacgctatgcggtcatctgtactgctggccatgc 385
Query: 181 atatacaaatggctcagtgttcagagctcctcagccgaaccagaccagcagcaaacatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atatacaaatggctcagtgttcagagctcctcagccgaaccagaccagcagcaaacatgc 445
Query: 241 ccaatttgtaaagctgagatctctcatacttcattagtccccctttacggccgcggaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccaatttgtaaagctgagatctctcatacttcattagtccccctttacggccgcggaaca 505
Query: 301 tctaattccgaatctgaatccaagaaactccagatgggtcttggaatacctcagaggcca 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tctaattccgaatctga-tccaagaaactccagatgggtcttggaatacctcagaggcca 564
Query: 361 cctccttacaacttgaatgctatgttaacttcgaaccgggcatcgaatccacatctaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 565 cctccttacaacttgaatgctatgttaacttcgaaccgggcatcgaatccacatcaaggt 624
Query: 421 gagcaactctatccaagttatttccactcacaatcacagccattacattatcagcagcac 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 625 gagcaactctatccaagttatttccactcacaatcacggccattacattatcagcagcac 684
Query: 481 tacctttacggaactcacggtgccaatggattaccttatcttggcggtgctgctatgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tacctttacggaactcacggtgccaatggattaccttatcttggcggtgctgctatgact 744
Query: 541 agtttctttaaccctgtgattggcatgttcggggagatggtcttgacgaggattttcggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agtttctttaaccctgtgattggcatgttcggggagatggtcttgacgaggattttcggg 804
Query: 601 gtctctgatgcaaatttgtttccttacccccatagtggaagtggcagtcccagaatgaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtctctgatgcaaatttgtttccttacccccatagtggaagtggcagtcccagaatgaga 864
Query: 661 aggcaggagatgcagattgacaagtctctaaacagagtttctatctttcttttgtgttgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 aggcaggagatgcagattgacaagtctctaaacagagtttctatctttcttttgtgttgt 924
Query: 721 attattttgtgtcttctcttattctgaag 749
|||||||||||||||||||||||||||||
Sbjct: 925 attattttgtgtcttctcttattctgaag 953
>gnl|LJGI|TC58834 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (24%)
Length = 975
Score = 73.8 bits (37), Expect = 1e-12
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 95 atggttgttttgattgcaatatttgcttggaatcagcgcatgatcctgtggtcacgctat 154
||||| |||||||||||||||| |||||||| | || ||||| || ||||| || ||||
Sbjct: 219 atggtggttttgattgcaatatctgcttggagtttgcacatgaaccagtggtgactctat 278
Query: 155 gcggtcatctgtactgctggccatgcatatacaaatggctc 195
| ||||| || ||||||||||| ||||| ||||| ||||||
Sbjct: 279 gtggtcacctttactgctggccctgcatctacaagtggctc 319
>gnl|LJGI|TC79154 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (44%)
Length = 1137
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 136 gatcctgtggtcacgctatgcggtcatctgtactgctggccatgcatatacaaatggct 194
||||| |||||||| || || || ||||| ||||||||||| ||||| |||||||||||
Sbjct: 379 gatccagtggtcactctctgtggccatctttactgctggccctgcatttacaaatggct 437
>gnl|LJGI|TC75097 similar to UniRef100_Q6R567 Cluster: Ring domain containing
protein; n=1; Capsicum annuum|Rep: Ring domain
containing protein - Capsicum annuum (Bell pepper),
partial (44%)
Length = 1190
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 136 gatcctgtggtcacgctatgcggtcatctgtactgctggccatgcatatacaaatggct 194
||||| |||||||| || || || ||||| ||||||||||| ||||| |||||||||||
Sbjct: 381 gatccagtggtcactctctgtggccatctttactgctggccctgcatttacaaatggct 439