Miyakogusa Predicted Gene
- Lj0g3v0282539.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0282539.1 Non Chatacterized Hit- tr|I1K4D0|I1K4D0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.9,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,CUFF.18803.1
(1614 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62582 homologue to UniRef100_A7Q1B3 Cluster: Chromoso... 1296 0.0
gnl|LJGI|GO009296 homologue to UniRef100_A7Q1B3 Cluster: Chromos... 1231 0.0
gnl|LJGI|AV418787 homologue to UniRef100_A7Q1B3 Cluster: Chromos... 817 0.0
gnl|LJGI|AV767222 111 1e-23
gnl|LJGI|BP075169 homologue to UniRef100_A9TCE5 Cluster: Predict... 86 8e-16
>gnl|LJGI|TC62582 homologue to UniRef100_A7Q1B3 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 950
Score = 1296 bits (654), Expect = 0.0
Identities = 703/710 (99%), Gaps = 7/710 (0%)
Strand = Plus / Plus
Query: 905 gcacccatgagttacagtctgaatgcggacaccatggacacatcctagctctatatgtgc 964
|||||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||||
Sbjct: 4 gcacccatgagt-acagtctga-tgcg-acaccatg-acacatcctagctctatatgtgc 59
Query: 965 aaactagaggagatttcattgtagttggtgatctgatgaaatcaatttccttgttgatct 1024
||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 60 aaactagag-agatt-cattgtagttggtgatctgatgaaatcaatt-ccttgttgatct 116
Query: 1025 ataagcatgaagaaggtgctattgaggagagagctcgtgactacaatgcaaattggatgt 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ataagcatgaagaaggtgctattgaggagagagctcgtgactacaatgcaaattggatgt 176
Query: 1085 cagctgttgaaatccttgatgatgacgtatacctaggtacggaaaatagtttcaatctct 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cagctgttgaaatccttgatgatgacgtatacctaggtacggaaaatagtttcaatctct 236
Query: 1145 ttacagttcggaaaaatagtgaaggtgctactgatgaagagcggggtcgtcttgaagtga 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttacagttcggaaaaatagtgaaggtgctactgatgaagagcggggtcgtcttgaagtga 296
Query: 1205 ttggtgagtatcaccttggggaatttgtcaatcggttccggcatggctcccttgtcatgc 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttggtgagtatcaccttggggaatttgtcaatcggttccggcatggctcccttgtcatgc 356
Query: 1265 gcttgccggattctgatgtcggccagattccaactgttattttcggcaccattaatggcg 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gcttgccggattctgatgtcggccagattccaactgttattttcggcaccattaatggcg 416
Query: 1325 ttatcggggtaattgcctctcttcctcatgagcagtatgttttcctggagaagctccagt 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttatcggggtaattgcctctcttcctcatgagcagtatgttttcctggagaagctccagt 476
Query: 1385 caaatttgaggaaggtgattaaaggcgttggaggactgagccatgagcaatggaggtcat 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 caaatttgaggaaggtgattaaaggcgttggaggactgagccatgagcaatggaggtcat 536
Query: 1445 ttaacaatgagaagaaaactgcggaagccagaaactttttggatggggatttgattgaat 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ttaacaatgagaagaaaactgcggaagccagaaactttttggatggggatttgattgaat 596
Query: 1505 cgtttcttgatcttaaccgcagtaagatggatgaggtttccaaggcattggacgtttctg 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cgtttcttgatcttaaccgcagtaagatggatgaggtttccaaggcattggacgtttctg 656
Query: 1565 tagaagagttatgcaagagagtggaagagttgactaggttgcactgagtt 1614
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tagaagagttatgcaagagagtggaagagttgactaggttgcactgagtt 706
>gnl|LJGI|GO009296 homologue to UniRef100_A7Q1B3 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 633
Score = 1231 bits (621), Expect = 0.0
Identities = 630/633 (99%)
Strand = Plus / Plus
Query: 758 tttttactgttgatgatggacagctacaactaattgctgagaaagagacaaaaggagctg 817
||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 tttttactgttgaagatggaaagctacaattaattgctgagaaagagacaaaaggagctg 60
Query: 818 tttactgcttgaatgcgttcaatggtaaattgcttgctgctattaatcaaaaaattcagc 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttactgcttgaatgcgttcaatggtaaattgcttgctgctattaatcaaaaaattcagc 120
Query: 878 tgtataaatgggtgctccgggatgatggcacccatgagttacagtctgaatgcggacacc 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtataaatgggtgctccgggatgatggcacccatgagttacagtctgaatgcggacacc 180
Query: 938 atggacacatcctagctctatatgtgcaaactagaggagatttcattgtagttggtgatc 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggacacatcctagctctatatgtgcaaactagaggagatttcattgtagttggtgatc 240
Query: 998 tgatgaaatcaatttccttgttgatctataagcatgaagaaggtgctattgaggagagag 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgaaatcaatttccttgttgatctataagcatgaagaaggtgctattgaggagagag 300
Query: 1058 ctcgtgactacaatgcaaattggatgtcagctgttgaaatccttgatgatgacgtatacc 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcgtgactacaatgcaaattggatgtcagctgttgaaatccttgatgatgacgtatacc 360
Query: 1118 taggtacggaaaatagtttcaatctctttacagttcggaaaaatagtgaaggtgctactg 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taggtacggaaaatagtttcaatctctttacagttcggaaaaatagtgaaggtgctactg 420
Query: 1178 atgaagagcggggtcgtcttgaagtgattggtgagtatcaccttggggaatttgtcaatc 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgaagagcggggtcgtcttgaagtgattggtgagtatcaccttggggaatttgtcaatc 480
Query: 1238 ggttccggcatggctcccttgtcatgcgcttgccggattctgatgtcggccagattccaa 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttccggcatggctcccttgtcatgcgcttgccggattctgatgtcggccagattccaa 540
Query: 1298 ctgttattttcggcaccattaatggcgttatcggggtaattgcctctcttcctcatgagc 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctgttattttcggcaccattaatggcgttatcggggtaattgcctctcttcctcatgagc 600
Query: 1358 agtatgttttcctggagaagctccagtcaaatt 1390
|||||||||||||||||||||||||||||||||
Sbjct: 601 agtatgttttcctggagaagctccagtcaaatt 633
>gnl|LJGI|AV418787 homologue to UniRef100_A7Q1B3 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 412
Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Plus
Query: 199 aggaaaaaggtctctcttgggacacaacctattacactgcggactttctcatccaagaat 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaaaaaggtctctcttgggacacaacctattacactgcggactttctcatccaagaat 60
Query: 259 actacccatgtatttgccgcatctgatcggccaactgtgatttatagtagtaacaaaaaa 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actacccatgtatttgccgcatctgatcggccaactgtgatttatagtagtaacaaaaaa 120
Query: 319 ttactgtatagtaatgtgaatctgaaggaagtgagtcacatgtgccctttcaactctgct 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttactgtatagtaatgtgaatctgaaggaagtgagtcacatgtgccctttcaactctgct 180
Query: 379 gctattcctgacagtttggcaattgcaaaagaaggtgagctcactattggcaccattgat 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctattcctgacagtttggcaattgcaaaagaaggtgagctcactattggcaccattgat 240
Query: 439 gacattcaaaaacttcatattcgcacaattccactgggggagcatgcacggcgtatctgt 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacattcaaaaacttcatattcgcacaattccactgggggagcatgcacggcgtatctgt 300
Query: 499 caccaggaacaatcaaggacttttgctatttgcagtttgaaatacaaccatacaagtgct 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caccaggaacaatcaaggacttttgctatttgcagtttgaaatacaaccatacaagtgct 360
Query: 559 gaagaatctgaaagtcattttgtccgcttgttagatgaccagacttttgagt 610
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagaatctgaaagtcattttgtccgcttgttagatgaccagacttttgagt 412
>gnl|LJGI|AV767222
Length = 345
Score = 111 bits (56), Expect = 1e-23
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 1524 cagtaagatggatgaggtttccaaggcattggacgtttctgtagaagagttatgcaagag 1583
|||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 329 cagtaaaatggataaggtttccaaggcattggacgtttctgtataagagttatgcaaaaa 270
Query: 1584 agtggaagagttgactaggttgcactga 1611
|||| || |||||| |||||||||||||
Sbjct: 269 agtgaaaaagttgattaggttgcactga 242
>gnl|LJGI|BP075169 homologue to UniRef100_A9TCE5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein -, partial (1%)
Length = 382
Score = 85.7 bits (43), Expect = 8e-16
Identities = 125/143 (87%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 1479 ctttttggatggggatttgattgaatcgtttcttgatctta-accgca-gtaaga-tgga 1535
|||||||||||||||| |||||||||||||||||||| ||| ||| || || | ||||
Sbjct: 381 ctttttggatggggatgtgattgaatcgtttcttgattttataccccacgtcgcactgga 322
Query: 1536 tgaggtttccaaggcattggac-gtttctgtag-aagagttatgc-aagagagtgg-aag 1591
||||||||||| | || ||||| |||||||||| |||||||| || |||||| ||| |||
Sbjct: 321 tgaggtttccaggccactggaccgtttctgtagtaagagttaagccaagagactgggaag 262
Query: 1592 agttgactaggttgcactgagtt 1614
|||||||||||||||||||||||
Sbjct: 261 agttgactaggttgcactgagtt 239