Miyakogusa Predicted Gene
- Lj0g3v0282389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0282389.1 Non Chatacterized Hit- tr|I1N6H9|I1N6H9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41590
PE,53.73,0,RING/U-box,NULL; SUBFAMILY NOT NAMED,NULL; RING ZINC FINGER
PROTEIN,NULL; no description,Zinc finger,CUFF.18789.1
(1137 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75582 similar to UniRef100_Q9SXW6 Cluster: Ring finge... 1074 0.0
gnl|LJGI|TC74271 712 0.0
gnl|LJGI|TC70714 58 1e-07
>gnl|LJGI|TC75582 similar to UniRef100_Q9SXW6 Cluster: Ring finger protein; n=1; Cicer
arietinum|Rep: Ring finger protein - Cicer arietinum
(Chickpea) (Garbanzo), partial (79%)
Length = 777
Score = 1074 bits (542), Expect = 0.0
Identities = 542/542 (100%)
Strand = Plus / Plus
Query: 596 aagaggaagaggcgtttaggcacctggagtgggagattctggtggcggttaacaatttgg 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaggaagaggcgtttaggcacctggagtgggagattctggtggcggttaacaatttgg 60
Query: 656 agatggatgttgcattgcatcatgaagttgagaatagttttgatgaaggctatttaacgg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatggatgttgcattgcatcatgaagttgagaatagttttgatgaaggctatttaacgg 120
Query: 716 ttcatgaatatgatagttttataccgaccgcgtttcaggatggttttatatccacagctg 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcatgaatatgatagttttataccgaccgcgtttcaggatggttttatatccacagctg 180
Query: 776 attacgaggttcttttcgggcagcttctgcagaatgagagtggcttgaaagggagccctc 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attacgaggttcttttcgggcagcttctgcagaatgagagtggcttgaaagggagccctc 240
Query: 836 ccgcagccaagagtttcgtggagagtctccccctggtcgagctcacggaggaggagttgc 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcagccaagagtttcgtggagagtctccccctggtcgagctcacggaggaggagttgc 300
Query: 896 gggggaaggatatggcgtgcgccatttgtaaggatgagatcatgttggaggagaaggtga 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggggaaggatatggcgtgcgccatttgtaaggatgagatcatgttggaggagaaggtga 360
Query: 956 ggaggctaccttgctcccattgttaccatggggactgcattttgccgtggttgagtattc 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaggctaccttgctcccattgttaccatggggactgcattttgccgtggttgagtattc 420
Query: 1016 gcaacacctgcccggtttgtcggttcgagttgcccacggatgatcctgattatgagcaga 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcaacacctgcccggtttgtcggttcgagttgcccacggatgatcctgattatgagcaga 480
Query: 1076 gtaagatcgagggtgctgccgcccatggtcttatggagcttgcaacagagatgcagtttt 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtaagatcgagggtgctgccgcccatggtcttatggagcttgcaacagagatgcagtttt 540
Query: 1136 ga 1137
||
Sbjct: 541 ga 542
>gnl|LJGI|TC74271
Length = 567
Score = 712 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 131 gccgttgctcctgccacgacatcagcataaaccccttctccggtgccatctgcgaccttc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gccgttgctcctgccacgacatcagcataaaccccttctccggtgccatctgcgaccttc 268
Query: 191 accaccaccgcccacaaggcttccagttagggtttgattttgacgacgaattcgatcccc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 accaccaccgcccacaaggcttccagttagggtttgattttgacgacgaattcgatcccc 328
Query: 251 aaaaccacgatcagcttttcgatttctccgtcggtgctgctcattcaaccggcgggctta 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaaaccacgatcagcttttcgatttctccgtcggtgctgctcattcaaccggcgggctta 388
Query: 311 gggttgtcggcttcggttccgattctgattccagcggcgacgagggcgggaacattggtg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gggttgtcggcttcggttccgattctgattccagcggcgacgagggcgggaacattggtg 448
Query: 371 gtgacagggttgaaggtgggtttgatgagtttgatgttcgattgtgttgggatagtctct 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtgacagggttgaaggtgggtttgatgagtttgatgttcgattgtgttgggatagtctct 508
Query: 431 gtttggaggatcagaggaacctcaatgaatgggaggaggtggtggaggagagtaggctg 489
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtttggaggatcagaggaacctcaatgaatgggaggaggtggtggaggagagtaggctg 567
Score = 176 bits (89), Expect = 2e-43
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 atgtctcgctattcttccaatccctttcattccgattccgattccgactctgtcaattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atgtctcgctattcttccaatccctttcattccgattccgattccgactctgtcaattgc 135
Query: 61 ttcgtcaccgatctcttcgaatcccaccg 89
|||||||||||||||||||||||||||||
Sbjct: 136 ttcgtcaccgatctcttcgaatcccaccg 164
>gnl|LJGI|TC70714
Length = 722
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1024 tgcccggtttgtcggttcgagttgcccacggatgatcctgattatgagcagag 1076
||||||||||| ||| |||||||||||| ||||||||||| || ||||||||
Sbjct: 8 tgcccggtttgccggcacgagttgcccactgatgatcctgactacgagcagag 60