Miyakogusa Predicted Gene

Lj0g3v0282239.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0282239.1 Non Chatacterized Hit- tr|I1NEQ9|I1NEQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9390
PE=,67.94,0,seg,NULL; SNF2_N,SNF2-related; Helicase_C,Helicase,
C-terminal; zf-C3HC4_2,NULL; HIRAN,HIP116, Rad5p,CUFF.18774.1
         (3393 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58907                                                       96   2e-18
gnl|LJGI|FS332154                                                      82   3e-14
gnl|LJGI|TC70352                                                       80   1e-13
gnl|LJGI|GO005822 weakly similar to UniRef100_Q0JF05 Cluster: Os...    68   4e-10

>gnl|LJGI|TC58907 
          Length = 1157

 Score = 95.6 bits (48), Expect = 2e-18
 Identities = 84/96 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2047 ttagaagacctattcagtctcttgcacttcttgggggctgaaccttggtgcagctgggca 2106
            ||||||||||||||||  |||||||| ||| || ||||||| ||||||||||||||||||
Sbjct: 502  ttagaagacctattcaacctcttgcatttcatgtgggctgatccttggtgcagctgggca 561

                                                
Query: 2107 tggtggcacaagctggttcaaaggccatatgagaat 2142
            |||| ||||| ||||  ||||| ||| |||||||||
Sbjct: 562  tggttgcacaggctgactcaaaagccttatgagaat 597


>gnl|LJGI|FS332154 
          Length = 780

 Score = 81.8 bits (41), Expect = 3e-14
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2047 ttagaagacctattcagtctcttgcacttcttgggggctgaaccttggtgcagctgggca 2106
            ||||||||||||||||  |||||||| ||| || ||||||| ||||||||||||||||||
Sbjct: 502  ttagaagacctattcaacctcttgcatttcatgtgggctgatccttggtgcagctgggca 561

                 
Query: 2107 tggtg 2111
            |||||
Sbjct: 562  tggtg 566


>gnl|LJGI|TC70352 
          Length = 588

 Score = 79.8 bits (40), Expect = 1e-13
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                       
Query: 866 tcattccacttgtgcaatcaggaaatgtgaaggttcgaggccgatgcattgctgcgccat 925
           |||||||||||||| |||||||| |||| |||||| ||||  |||| |||| ||| | | 
Sbjct: 1   tcattccacttgtggaatcaggatatgtaaaggtttgaggatgatggattgttgctctac 60

                                                   
Query: 926 atagcctgcaaatgatgcaagaaatcatgttgttagtgag 965
           |||||| |||||||||||  |||||||||| |||||||||
Sbjct: 61  atagccagcaaatgatgcgcgaaatcatgtggttagtgag 100


>gnl|LJGI|GO005822 weakly similar to UniRef100_Q0JF05 Cluster: Os04g0177300 protein;
            n=1; Oryza sativa Japonica Group|Rep: Os04g0177300
            protein - Oryza sativa subsp. japonica (Rice), partial
            (4%)
          Length = 684

 Score = 67.9 bits (34), Expect = 4e-10
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2108 ggtggcacaagctggttcaaaggccatatgagaataatgacccaagggccctgaaattgg 2167
            |||| ||||||||| |||||||||| |||| | ||  |||   ||| ||| |||||| ||
Sbjct: 94   ggtgacacaagctgattcaaaggccttatggggatggtgatttaagagccatgaaatcgg 153

                                          
Query: 2168 tcaagggcattttgaggacactgatgttaa 2197
            ||||||||||||||||||||||| ||||||
Sbjct: 154  tcaagggcattttgaggacactggtgttaa 183