Miyakogusa Predicted Gene
- Lj0g3v0282219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0282219.1 Non Chatacterized Hit- tr|B7ZX16|B7ZX16_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,43.1,8e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; HR_lesion,HR-like
lesion-inducer,CUFF.18781.1
(477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO009812 similar to UniRef100_A7NX51 Cluster: Chromosom... 930 0.0
gnl|LJGI|TC69138 similar to UniRef100_A7NX51 Cluster: Chromosome... 525 e-149
gnl|LJGI|TC60494 similar to UniRef100_A7NX51 Cluster: Chromosome... 264 4e-70
gnl|LJGI|TC75739 103 1e-21
>gnl|LJGI|GO009812 similar to UniRef100_A7NX51 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 690
Score = 930 bits (469), Expect = 0.0
Identities = 472/473 (99%)
Strand = Plus / Plus
Query: 1 atgggcttcgcttcctttctgggtcgtctcctctttgcttccctcttcatcctctccgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgggcttcgcttcctttctgggtcgtctcctctttgcttccctcttcatcctctccgca 181
Query: 61 tggcagatgtatgttgaatttgatgccaatggtggacccattgctaaggagttgattccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tggcagatgtatgttgaatttgatgccaatggtggacccattgctaaggagttgattccc 241
Query: 121 aagctcactgttctaaagaaaaatttgtcctccaaattgggggtagggctaccagatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagctcactgttctaaagaaaaatttgtcctccaaattgggggtagggctaccagatatt 301
Query: 181 gatgaacagcattttgttgcaacaatcatatttctaaaggggcttggagggattctattt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 302 gatgaacagcattttgttgcaactatcatatttctaaaggggcttggagggattctattt 361
Query: 241 gtgtttggcagcacacttggagcttttttcttgcttctgcatcaggggcttactactcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtgtttggcagcacacttggagcttttttcttgcttctgcatcaggggcttactactcca 421
Query: 301 cttctgcatgatttctataactatggacccagcaagcctgaatatcatctcttgctgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cttctgcatgatttctataactatggacccagcaagcctgaatatcatctcttgctgaac 481
Query: 361 gatttcatgctgaacacagcagtttttggagcattgctattctttatagggatgaagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gatttcatgctgaacacagcagtttttggagcattgctattctttatagggatgaagaac 541
Query: 421 acaattcccaggagacaactaaggaagaagaccccaaaaacaaagacagttta 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acaattcccaggagacaactaaggaagaagaccccaaaaacaaagacagttta 594
>gnl|LJGI|TC69138 similar to UniRef100_A7NX51 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 621
Score = 525 bits (265), Expect = e-149
Identities = 271/273 (99%)
Strand = Plus / Plus
Query: 1 atgggcttcgcttcctttctgggtcgtctcctctttgcttccctcttcatcctctccgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgggcttcgcttcctttctgggtcgtctcctctttgcttccctcttcatcctctccgca 137
Query: 61 tggcagatgtatgttgaatttgatgccaatggtggacccattgctaaggagttgattccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tggcagatgtatgttgaatttgatgccaatggtggacccattgctaaggagttgattccc 197
Query: 121 aagctcactgttctaaagaaaaatttgtcctccaaattgggggtagggctaccagatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aagctcactgttctaaagaaaaatttgtcctccaaattgggggtagggctaccagatatt 257
Query: 181 gatgaacagcattttgttgcaacaatcatatttctaaaggggcttggagggattctattt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 258 gatgaacagcattttgttgcaactatcatatttctaaaggggcttggagggattctattt 317
Query: 241 gtgtttggcagcacacttggagcttttttcttg 273
|||||||||||||| ||||||||||||||||||
Sbjct: 318 gtgtttggcagcacgcttggagcttttttcttg 350
>gnl|LJGI|TC60494 similar to UniRef100_A7NX51 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (94%)
Length = 805
Score = 264 bits (133), Expect = 4e-70
Identities = 375/453 (82%), Gaps = 2/453 (0%)
Strand = Plus / Plus
Query: 13 tcctttctgggtcgtctcctctttgcttccctcttcatcctctccgcatggcagatgtat 72
||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 57 tccttcctgggtcgtgtcctcttcgcttccctcttcatcctctccgcatggcagatgttt 116
Query: 73 gttgaatttgatgccaatggtggacccattgctaaggagttgattcccaagctcactgtt 132
|||||| ||||||| |||||||||| ||| |||||||||||||||||||||| || |
Sbjct: 117 catgaattcgatgccactggtggaccccctgcgaaggagttgattcccaagctcaatgct 176
Query: 133 ctaaagaaaaatttgtcctccaaattgggggtagggctaccagatattgatgaacagcat 192
|| | ||| ||||| ||||| || |||||| | | | ||||||||||| || | |||
Sbjct: 177 cttaggaagaatttatcctctaatttggggttggtgataccagatattaatattcggcaa 236
Query: 193 tttgttgcaacaatcatatttctaaaggggcttggagggattctatttgtgtttggcagc 252
|||| || || |||||||||||||||||| |||| ||||||||||||||| | || |||
Sbjct: 237 gttgtagctactatcatatttctaaagggggttggtgggattctatttgtggtcggtagc 296
Query: 253 acacttggagcttttttcttgcttctgcatcaggggcttactactccacttctgcatgat 312
||||||||| ||| | | ||||| || || | |||| | || || ||||| |||||
Sbjct: 297 acacttggatcttatcttctgcttgtgtatttgttgcttgccaccccggttctgtatgat 356
Query: 313 ttctataactatggacccagcaagcctgaatatcatctc-ttgctgaacgatttcatgct 371
||||| |||||| |||| | ||||||||||| || || ||||||| |||||||| |
Sbjct: 357 ttctacaactatagacctaataagcctgaata-cagttcgctgctgaatgatttcattca 415
Query: 372 gaacacagcagtttttggagcattgctattctttatagggatgaagaacacaattcccag 431
|| ||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 416 gagcacagcactttttggtgcattgctattcttcatagggatgaagaactcaattcccag 475
Query: 432 gagacaactaaggaagaagaccccaaaaacaaa 464
| |||| | |||||||||||| ||||||||||
Sbjct: 476 aaaacaattcaggaagaagaccacaaaaacaaa 508
>gnl|LJGI|TC75739
Length = 536
Score = 103 bits (52), Expect = 1e-21
Identities = 100/116 (86%)
Strand = Plus / Plus
Query: 69 gtatgttgaatttgatgccaatggtggacccattgctaaggagttgattcccaagctcac 128
|||||||| ||||||| || ||||||||||||||||| ||||| |||||| |||||||
Sbjct: 258 gtatgttgcatttgattcccatggtggacccattgctcaggaggtgattctgtagctcac 317
Query: 129 tgttctaaagaaaaatttgtcctccaaattgggggtagggctaccagatattgatg 184
|| |||||||||| |||||||| |||||| || ||||||||||| |||||||||
Sbjct: 318 ctttttaaagaaaaaattgtcctctaaattgtggttagggctaccaaatattgatg 373