Miyakogusa Predicted Gene
- Lj0g3v0282189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0282189.1 Non Chatacterized Hit- tr|I1NER6|I1NER6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7248
PE=,82.73,0,HLH,Helix-loop-helix domain; NAI1, DNA BINDING /
TRANSCRIPTION FACTOR,NULL; CIRCADIAN PROTEIN CLOCK/,CUFF.18773.1
(654 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76067 weakly similar to UniRef100_A9RJX7 Cluster: Pre... 1247 0.0
gnl|LJGI|TC58993 weakly similar to UniRef100_A9RJX7 Cluster: Pre... 1045 0.0
gnl|LJGI|GO020222 weakly similar to UniRef100_A9RJX7 Cluster: Pr... 975 0.0
gnl|LJGI|TC81987 599 e-171
gnl|LJGI|TC57656 homologue to UniRef100_A7PHE8 Cluster: Chromoso... 111 6e-24
>gnl|LJGI|TC76067 weakly similar to UniRef100_A9RJX7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(52%)
Length = 672
Score = 1247 bits (629), Expect = 0.0
Identities = 632/633 (99%)
Strand = Plus / Plus
Query: 1 atggattccttagaagacagcggctgttgggatttcctcgattactccttccttgatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggattccttagaagacagcggctgttgggatttcctcgattactccttccttgatcct 95
Query: 61 cctcccaccgatttcctctggtccaatcccaatcaaagtgtgatcgcggaagccgacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 cctcccaccgatttcctctggtccaatcccaatcaaagtgtgatcgcggaagccgacttt 155
Query: 121 cctagtgttgctgttgccagtcaagagaacaccaggaagagggggcgcactgattcatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cctagtgttgctgttgccagtcaagagaacaccaggaagagggggcgcactgattcatgc 215
Query: 181 tgcaaggcgggaacaaaagcctgccgtgagaaacaacggagggagaaactcaatgaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tgcaaggcgggaacaaaagcctgccgtgagaaacaacggagggagaaactcaatgaaagg 275
Query: 241 ttttgtgaattgagctctgttttggaacctgggagacctgtgaaaacagataagccagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttttgtgaattgagctctgttttggaacctgggagacctgtgaaaacagataagccagct 335
Query: 301 atacttgatgatgctatcagagtcttgagccaacttaaaactgaagctcaggaactcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atacttgatgatgctatcagagtcttgagccaacttaaaactgaagctcaggaactcaaa 395
Query: 361 gaaacaaatgagaaattattggaggaaataaaatgtttaaaggcagagaaaaacgaactc 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 396 gaaacaaatgagaaattattggaggaaataaaatgtttaaaggtagagaaaaacgaactc 455
Query: 421 cgtgaagagaaacttgttcttaaagcagataaagaaaggattgagaagaagttgaaagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgtgaagagaaacttgttcttaaagcagataaagaaaggattgagaagaagttgaaagcc 515
Query: 481 ttgcccgtctcagcaggagggtttttgcctccccctatggcagcatatcaaccaacggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttgcccgtctcagcaggagggtttttgcctccccctatggcagcatatcaaccaacggtg 575
Query: 541 aacaagatggctgtttatccaaactatggctatattccaatgtggcaatatcttccttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aacaagatggctgtttatccaaactatggctatattccaatgtggcaatatcttccttca 635
Query: 601 tctgcccgagatacatcccacgatcatgagctc 633
|||||||||||||||||||||||||||||||||
Sbjct: 636 tctgcccgagatacatcccacgatcatgagctc 668
>gnl|LJGI|TC58993 weakly similar to UniRef100_A9RJX7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(50%)
Length = 904
Score = 1045 bits (527), Expect = 0.0
Identities = 558/563 (99%), Gaps = 4/563 (0%)
Strand = Plus / Plus
Query: 92 atcaaagtgtgatcgcggaagccgactttcctagtgttgctgttgccagtcaagagaaca 151
|||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||
Sbjct: 8 atcaaagtgtgatcgcggaagccgactttc-tagtgt-gctgt-gccagtcaagagaaca 64
Query: 152 ccaggaagagggggcgcactgattcatgctgcaaggcgggaacaaaagcctgccgtgaga 211
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ccaggaagagggg-cgcactgattcatgctgcaaggcgggaacaaaagcctgccgtgaga 123
Query: 212 aacaacggagggagaaactcaatgaaaggttttgtgaattgagctctgttttggaacctg 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aacaacggagggagaaactcaatgaaaggttttgtgaattgagctctgttttggaacctg 183
Query: 272 ggagacctgtgaaaacagataagccagctatacttgatgatgctatcagagtcttgagcc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggagacctgtgaaaacagataagccagctatacttgatgatgctatcagagtcttgagcc 243
Query: 332 aacttaaaactgaagctcaggaactcaaagaaacaaatgagaaattattggaggaaataa 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aacttaaaactgaagctcaggaactcaaagaaacaaatgagaaattattggaggaaataa 303
Query: 392 aatgtttaaaggcagagaaaaacgaactccgtgaagagaaacttgttcttaaagcagata 451
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aatgtttaaaggtagagaaaaacgaactccgtgaagagaaacttgttcttaaagcagata 363
Query: 452 aagaaaggattgagaagaagttgaaagccttgcccgtctcagcaggagggtttttgcctc 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagaaaggattgagaagaagttgaaagccttgcccgtctcagcaggagggtttttgcctc 423
Query: 512 cccctatggcagcatatcaaccaacggtgaacaagatggctgtttatccaaactatggct 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cccctatggcagcatatcaaccaacggtgaacaagatggctgtttatccaaactatggct 483
Query: 572 atattccaatgtggcaatatcttccttcatctgcccgagatacatcccacgatcatgagc 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atattccaatgtggcaatatcttccttcatctgcccgagatacatcccacgatcatgagc 543
Query: 632 tcaggcctcctgctgcgtagttg 654
|||||||||||||||||||||||
Sbjct: 544 tcaggcctcctgctgcgtagttg 566
>gnl|LJGI|GO020222 weakly similar to UniRef100_A9RJX7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(52%)
Length = 733
Score = 975 bits (492), Expect = 0.0
Identities = 498/500 (99%)
Strand = Plus / Plus
Query: 155 ggaagagggggcgcactgattcatgctgcaaggcgggaacaaaagcctgccgtgagaaac 214
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 155 ggaagagggggcgcactgattcatgctgcaaggcgggaacaaaagcttgccgtgagaaac 214
Query: 215 aacggagggagaaactcaatgaaaggttttgtgaattgagctctgttttggaacctggga 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aacggagggagaaactcaatgaaaggttttgtgaattgagctctgttttggaacctggga 274
Query: 275 gacctgtgaaaacagataagccagctatacttgatgatgctatcagagtcttgagccaac 334
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 275 gacctgtgaaaacagataagccagctatacttgatgacgctatcagagtcttgagccaac 334
Query: 335 ttaaaactgaagctcaggaactcaaagaaacaaatgagaaattattggaggaaataaaat 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttaaaactgaagctcaggaactcaaagaaacaaatgagaaattattggaggaaataaaat 394
Query: 395 gtttaaaggcagagaaaaacgaactccgtgaagagaaacttgttcttaaagcagataaag 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtttaaaggcagagaaaaacgaactccgtgaagagaaacttgttcttaaagcagataaag 454
Query: 455 aaaggattgagaagaagttgaaagccttgcccgtctcagcaggagggtttttgcctcccc 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaaggattgagaagaagttgaaagccttgcccgtctcagcaggagggtttttgcctcccc 514
Query: 515 ctatggcagcatatcaaccaacggtgaacaagatggctgtttatccaaactatggctata 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctatggcagcatatcaaccaacggtgaacaagatggctgtttatccaaactatggctata 574
Query: 575 ttccaatgtggcaatatcttccttcatctgcccgagatacatcccacgatcatgagctca 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttccaatgtggcaatatcttccttcatctgcccgagatacatcccacgatcatgagctca 634
Query: 635 ggcctcctgctgcgtagttg 654
||||||||||||||||||||
Sbjct: 635 ggcctcctgctgcgtagttg 654
Score = 222 bits (112), Expect = 2e-57
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 atggattccttagaagacagcggctgttgggatttcctcgattactccttccttgatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atggattccttagaagacagcggctgttgggatttcctcgattactccttccttgatcct 107
Query: 61 cctcccaccgatttcctctggtccaatcccaatcaaagtgtgatcgcggaag 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 cctcccaccgatttcctctggtccaatcccaatcaaagtgtgatcgcggaag 159
>gnl|LJGI|TC81987
Length = 621
Score = 599 bits (302), Expect = e-171
Identities = 305/306 (99%)
Strand = Plus / Plus
Query: 326 tgagccaacttaaaactgaagctcaggaactcaaagaaacaaatgagaaattattggagg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgagccaacttaaaactgaagctcaggaactcaaagaaacaaatgagaaattattggagg 375
Query: 386 aaataaaatgtttaaaggcagagaaaaacgaactccgtgaagagaaacttgttcttaaag 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaataaaatgtttaaaggcagagaaaaacgaactccgtgaagagaaacttgttcttaaag 435
Query: 446 cagataaagaaaggattgagaagaagttgaaagccttgcccgtctcagcaggagggtttt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagataaagaaaggattgagaagaagttgaaagccttgcccgtctcagcaggagggtttt 495
Query: 506 tgcctccccctatggcagcatatcaaccaacggtgaacaagatggctgtttatccaaact 565
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 496 tgcctccccctatggcagcatatcaaccaacggtgaacaagatggatgtttatccaaact 555
Query: 566 atggctatattccaatgtggcaatatcttccttcatctgcccgagatacatcccacgatc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atggctatattccaatgtggcaatatcttccttcatctgcccgagatacatcccacgatc 615
Query: 626 atgagc 631
||||||
Sbjct: 616 atgagc 621
Score = 218 bits (110), Expect = 3e-56
Identities = 113/114 (99%)
Strand = Plus / Plus
Query: 97 agtgtgatcgcggaagccgactttcctagtgttgctgttgccagtcaagagaacaccagg 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 agtgtgatcgcggaagccgactttcctagtgttgctgttgccagtcaagagaacaccagg 265
Query: 157 aagagggggcgcactgattcatgctgcaaggcgggaacaaaagcctgccgtgag 210
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aagagggggcgcagtgattcatgctgcaaggcgggaacaaaagcctgccgtgag 319
>gnl|LJGI|TC57656 homologue to UniRef100_A7PHE8 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 842
Score = 111 bits (56), Expect = 6e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 98 gtgtgatcgcggaagccgactttcctagtgttgctgttgccagtcaagagaacaccagga 157
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 94 gtgtgatcgcggaagccgactttccaagtggtgctgttgccagtcaagagaacaccagga 153
Query: 158 agag 161
||||
Sbjct: 154 agag 157