Miyakogusa Predicted Gene
- Lj0g3v0281489.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0281489.1 Non Chatacterized Hit- tr|I1MN40|I1MN40_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57465
PE,83.99,0,VWA_2,NULL; UIM,Ubiquitin interacting motif; 26S PROTEASOME
NON-ATPASE REGULATORY SUBUNIT 4,NULL; vo,CUFF.18717.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58819 similar to UniRef100_A7QDW0 Cluster: Chromosome... 1187 0.0
gnl|LJGI|TC60568 similar to UniRef100_O81340 Cluster: 26S protea... 593 e-168
gnl|LJGI|TC69367 similar to UniRef100_A7QDW0 Cluster: Chromosome... 505 e-142
gnl|LJGI|TC68581 similar to UniRef100_A7QDW0 Cluster: Chromosome... 482 e-135
gnl|LJGI|TC81621 similar to UniRef100_A7QDW0 Cluster: Chromosome... 262 5e-69
gnl|LJGI|TC67586 similar to UniRef100_A7QDW0 Cluster: Chromosome... 117 2e-25
>gnl|LJGI|TC58819 similar to UniRef100_A7QDW0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1634
Score = 1187 bits (599), Expect = 0.0
Identities = 599/599 (100%)
Strand = Plus / Plus
Query: 1 atggtgctcgaggcgacgatgatctgtattgacaattctgaatggatgcgtaatggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggtgctcgaggcgacgatgatctgtattgacaattctgaatggatgcgtaatggggac 159
Query: 61 tactctccttctcgatttcaagcccaagcagacgctgtcaatcttatttgtggtgctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tactctccttctcgatttcaagcccaagcagacgctgtcaatcttatttgtggtgctaaa 219
Query: 121 acccagtctaatcctgagaatacggttggagttctcacgatggcggggaagggtgttcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 acccagtctaatcctgagaatacggttggagttctcacgatggcggggaagggtgttcgt 279
Query: 181 gttttggtcacccctaccagtgatttgggaaagatcttagcttgtatgcatggactagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gttttggtcacccctaccagtgatttgggaaagatcttagcttgtatgcatggactagaa 339
Query: 241 ataggtggtgagatgaacctagctgctggcattcaggtggcacagttagctcttaagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ataggtggtgagatgaacctagctgctggcattcaggtggcacagttagctcttaagcat 399
Query: 301 cggcagaataagaaacagcagcaaaggattattgtctttactgggagtcctatcaagcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cggcagaataagaaacagcagcaaaggattattgtctttactgggagtcctatcaagcac 459
Query: 361 gagaagaaaatgttggagatgattgggcgaaagttgaaaaagaatagcgttgcacttgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gagaagaaaatgttggagatgattgggcgaaagttgaaaaagaatagcgttgcacttgac 519
Query: 421 attgtcaattttggtgaagaagacgagggaaagacagagaagctggatgcactccttgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 attgtcaattttggtgaagaagacgagggaaagacagagaagctggatgcactccttgca 579
Query: 481 gccgttaataataatgataccagccgcatggctcatgttccacctggtccaaatgctcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gccgttaataataatgataccagccgcatggctcatgttccacctggtccaaatgctcta 639
Query: 541 tctgatgtacttataagtacaccaatttttactggtgatggagagggtggaagtggttt 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tctgatgtacttataagtacaccaatttttactggtgatggagagggtggaagtggttt 698
Score = 1156 bits (583), Expect = 0.0
Identities = 586/587 (99%)
Strand = Plus / Plus
Query: 632 gtggtgtatctggatatgactttggcgtggatccgaacttggacccggaattggctcttg 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gtggtgtatctggatatgactttggcgtggatccgaacttggacccggaattggctcttg 790
Query: 692 ctctaagagtttcaatggaagaggagagggcccgacaggaagcagctgcaaagaaggctg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ctctaagagtttcaatggaagaggagagggcccgacaggaagcagctgcaaagaaggctg 850
Query: 752 cagaggatgcttccaaggagaatggtggtgagcagcaagccagctcgcaggatgcagcca 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 cagaggatgcttccaaggagaatggtggtgagcagcaagccagctcgcaggatgcagcca 910
Query: 812 tgattgagcgtgctagtgaagaaacttcagaagctgcgactaagacaaatgatatgatgg 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tgattgagcgtgctagtgaagaaacttcagaagctgcgactaagacaaatgatatgatgg 970
Query: 872 acgatgagaatgctctactacagcaggcccttgctatgtcaatggatgatcctgtgatta 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 acgatgagaatgctctactacagcaggcccttgctatgtcaatggatgatcctgtgatta 1030
Query: 932 acaaagatatgagagatacagatatgtctgaagcagctgcagatgatcctgagttagctt 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 acaaagatatgagagatacagatatgtctgaagcagctgcagatgatcctgagttagctt 1090
Query: 992 tagctctccaattgtcagtagcagatggcagtgaggactcaggaagccagtcagacatga 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 tagctctccaattgtcagtagcagatggcagtgaggactcaggaagccagtcagacatga 1150
Query: 1052 gtaaattgttggcagatcagtcgtttgtatcttctatccttgcatcgcttcccggggttg 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 gtaaattgttggcagatcagtcgtttgtatcttctatccttgcatcgcttcccggggttg 1210
Query: 1112 acccaaatgacccatctgtcaaagatttactggcctccatgcaaaatcagtctgaacccc 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 acccaaatgacccatctgtcaaagatttactggcctccatgcaaaatcagtctgaacccc 1270
Query: 1172 aacagaagaatgaagacaagccaccaaatgaggaggagaagaaataa 1218
||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1271 aacagaagaatgaagacaagccacccaatgaggaggagaagaaataa 1317
>gnl|LJGI|TC60568 similar to UniRef100_O81340 Cluster: 26S proteasome regulatory
subunit S5A; n=1; Mesembryanthemum crystallinum|Rep: 26S
proteasome regulatory subunit S5A - Mesembryanthemum
crystallinum (Common ice plant), partial (73%)
Length = 944
Score = 593 bits (299), Expect = e-168
Identities = 524/599 (87%)
Strand = Plus / Plus
Query: 1 atggtgctcgaggcgacgatgatctgtattgacaattctgaatggatgcgtaatggggac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 54 atggtgctcgaggcgacaatgatctgtattgacaattctgaatggatgcgtaacggagat 113
Query: 61 tactctccttctcgatttcaagcccaagcagacgctgtcaatcttatttgtggtgctaaa 120
||| ||| |||||||||||||| |||||||||||||||||||| ||||| ||||| |||
Sbjct: 114 tacaatccctctcgatttcaagctcaagcagacgctgtcaatctcatttgcggtgccaaa 173
Query: 121 acccagtctaatcctgagaatacggttggagttctcacgatggcggggaagggtgttcgt 180
|| ||||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 174 acacagtctaatccggaaaatacagtgggagttctcacaatggcagggaaaggtgttcgt 233
Query: 181 gttttggtcacccctaccagtgatttgggaaagatcttagcttgtatgcatggactagaa 240
|||||||||||||||||||| ||| |||| ||||||||||| || ||||||||||||||
Sbjct: 234 gttttggtcacccctaccagcgatctgggcaagatcttagcctgcatgcatggactagag 293
Query: 241 ataggtggtgagatgaacctagctgctggcattcaggtggcacagttagctcttaagcat 300
|| ||||||||||||||||| ||||| |||||||| || || ||||| ||||||||||||
Sbjct: 294 attggtggtgagatgaaccttgctgccggcattcaagttgcgcagttggctcttaagcat 353
Query: 301 cggcagaataagaaacagcagcaaaggattattgtctttactgggagtcctatcaagcac 360
||||| ||||| || ||||||||| ||||| |||| ||| |||| |||||| | |||||
Sbjct: 354 cggcaaaataaaaagcagcagcaacggattgttgtttttgctggaagtcctgttaagcat 413
Query: 361 gagaagaaaatgttggagatgattgggcgaaagttgaaaaagaatagcgttgcacttgac 420
|| ||||||||| |||||||||| ||| | ||| ||||||||||||| || ||||||||
Sbjct: 414 gaaaagaaaatgctggagatgatagggaggaagctgaaaaagaatagtgtagcacttgat 473
Query: 421 attgtcaattttggtgaagaagacgagggaaagacagagaagctggatgcactccttgca 480
||| | ||||||||||||||||| ||||| ||||| ||||||||||| || || |||||
Sbjct: 474 attattaattttggtgaagaagatgaggggaagacggagaagctggaagctcttcttgcg 533
Query: 481 gccgttaataataatgataccagccgcatggctcatgttccacctggtccaaatgctcta 540
|| ||||| |||||||||| ||||| ||| | | ||||||||||||||||||||||||
Sbjct: 534 gctgttaacaataatgatagcagccacattgtttctgttccacctggtccaaatgctctt 593
Query: 541 tctgatgtacttataagtacaccaatttttactggtgatggagagggtggaagtggttt 599
||||||||||| ||||||||||| || |||||||||||||| || ||||||||||||||
Sbjct: 594 tctgatgtactgataagtacacctatatttactggtgatggggaaggtggaagtggttt 652
Score = 172 bits (87), Expect = 3e-42
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 632 gtggtgtatctggatatgactttggcgtggatccgaacttggacccggaattggctcttg 691
||||||||||||||||||| ||||| || ||||| |||||||| || |||||||||||||
Sbjct: 682 gtggtgtatctggatatgagtttggtgttgatccaaacttggatcctgaattggctcttg 741
Query: 692 ctctaagagtttcaatggaagaggagagggcccgacaggaagcagctgcaaagaaggctg 751
|||||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||
Sbjct: 742 ctctaagagtttcaatggaagaggagagggccaggcaggaagcagcagccaagaaggctg 801
Query: 752 cagagga 758
|||||||
Sbjct: 802 cagagga 808
>gnl|LJGI|TC69367 similar to UniRef100_A7QDW0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 961
Score = 505 bits (255), Expect = e-142
Identities = 465/535 (86%)
Strand = Plus / Plus
Query: 1 atggtgctcgaggcgacgatgatctgtattgacaattctgaatggatgcgtaatggggac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 136 atggtgctcgaggcgacaatgatctgtattgacaattctgaatggatgcgtaacggagat 195
Query: 61 tactctccttctcgatttcaagcccaagcagacgctgtcaatcttatttgtggtgctaaa 120
||| ||| |||||||||||||| |||||||||||||||||||| ||||| ||||| |||
Sbjct: 196 tacaatccctctcgatttcaagctcaagcagacgctgtcaatctcatttgcggtgccaaa 255
Query: 121 acccagtctaatcctgagaatacggttggagttctcacgatggcggggaagggtgttcgt 180
|| ||||||||||| || ||||| || ||||||||||| ||||| ||||| |||||||||
Sbjct: 256 acacagtctaatccggaaaatacagtgggagttctcacaatggcagggaaaggtgttcgt 315
Query: 181 gttttggtcacccctaccagtgatttgggaaagatcttagcttgtatgcatggactagaa 240
|||||||||||||||||||| ||| |||| ||||||||||| || ||||||||||||||
Sbjct: 316 gttttggtcacccctaccagcgatctgggcaagatcttagcctgcatgcatggactagag 375
Query: 241 ataggtggtgagatgaacctagctgctggcattcaggtggcacagttagctcttaagcat 300
|| ||||||||||||||||| ||||| |||||||| || || ||||| ||||||||||||
Sbjct: 376 attggtggtgagatgaaccttgctgccggcattcaagttgcgcagttggctcttaagcat 435
Query: 301 cggcagaataagaaacagcagcaaaggattattgtctttactgggagtcctatcaagcac 360
||||| ||||| || ||||||||| ||||| |||| ||| |||| |||||| | |||||
Sbjct: 436 cggcaaaataaaaagcagcagcaacggattgttgtttttgctggaagtcctgttaagcat 495
Query: 361 gagaagaaaatgttggagatgattgggcgaaagttgaaaaagaatagcgttgcacttgac 420
|| ||||||||| |||||||||| ||| | ||| ||||||||||||| || ||||||||
Sbjct: 496 gaaaagaaaatgctggagatgatagggaggaagctgaaaaagaatagtgtagcacttgat 555
Query: 421 attgtcaattttggtgaagaagacgagggaaagacagagaagctggatgcactccttgca 480
||| | ||||||||||||||||| ||||| ||||| ||||||||||| || || |||||
Sbjct: 556 attattaattttggtgaagaagatgaggggaagacggagaagctggaagctcttcttgcg 615
Query: 481 gccgttaataataatgataccagccgcatggctcatgttccacctggtccaaatg 535
|| ||||| |||||||||| ||||| || | | ||||||||||||||||||||
Sbjct: 616 gctgttaacaataatgatagcagccaaattgtttctgttccacctggtccaaatg 670
>gnl|LJGI|TC68581 similar to UniRef100_A7QDW0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 1039
Score = 482 bits (243), Expect = e-135
Identities = 501/586 (85%), Gaps = 12/586 (2%)
Strand = Plus / Plus
Query: 632 gtggtgtatctggatatgactttggcgtggatccgaacttggacccggaattggctcttg 691
||||||||||||||||||| ||||| || ||||| |||||||| || |||||||||||||
Sbjct: 129 gtggtgtatctggatatgagtttggtgttgatccaaacttggatcctgaattggctcttg 188
Query: 692 ctctaagagtttcaatggaagaggagagggcccgacaggaagcagctgcaaagaaggctg 751
|||||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||
Sbjct: 189 ctctaagagtttcaatggaagaggagagggccaggcaggaagcagcagccaagaaggctg 248
Query: 752 cagaggatgcttccaag---gagaatggtggtgagcagcaagccagctcgcaggatgcag 808
||||||| || |||| ||||| || ||||| | ||||||| || ||||||
Sbjct: 249 cagaggaggcggccaaccaagagaaaggaggtga------aaccagctcccaagatgcaa 302
Query: 809 ccatgattgagcgtgctagtgaagaaacttcagaagctgcgactaagacaaatgatatga 868
| |||| ||| ||||| |||| || ||||| ||||||| || ||| |||| |||| | |
Sbjct: 303 caatgactgaacgtgccagtgcagccacttctgaagctgagaataaaacaattgatttaa 362
Query: 869 tggacgatgagaatgctctactacagcaggcccttgctatgtcaatggatgatcctgtga 928
|||| ||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||||
Sbjct: 363 tggatgatgagaatgccctactccagcaggcacttgcaatgtcaatggatgaccctgtga 422
Query: 929 ttaacaaagatatgagagatacagatatgtctgaagcagctgcagatgatcctgagttag 988
|| | | ||| | | |||||| |||||||| |||||| |||||||||| ||||| || |
Sbjct: 423 gtagccatgatgtaaaagatacggatatgtcagaagcacctgcagatgaccctgatttgg 482
Query: 989 ctttagctctccaattgtcagtagcagatggcagtgaggactcaggaagccagtc---ag 1045
| |||||||||||||||||||||||||||||| |||| |||||||||||||| ||
Sbjct: 483 cactagctctccaattgtcagtagcagatggcacaaaggattcaggaagccagtcgtcag 542
Query: 1046 acatgagtaaattgttggcagatcagtcgtttgtatcttctatccttgcatcgcttcccg 1105
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 543 acatgagtaaattgttggcagatcaatcttttgtatcttctatccttgcatcgcttccag 602
Query: 1106 gggttgacccaaatgacccatctgtcaaagatttactggcctccatgcaaaatcagtctg 1165
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 603 gggttgacccaaatgacccttctgtcaaagatttactggcctccatgcaaaatcaatctg 662
Query: 1166 aaccccaacagaagaatgaagacaagccaccaaatgaggaggagaa 1211
| || | |||||||||| ||||||||| || |||||||| ||||
Sbjct: 663 agcctgagaagaagaatgacgacaagccatcagatgaggagaagaa 708
Score = 119 bits (60), Expect = 4e-26
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 516 tgttccacctggtccaaatgctctatctgatgtacttataagtacaccaatttttactgg 575
|||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct: 16 tgttccacctggtccaaatgctctttctgatgtactgataagtacacctatatttactgg 75
Query: 576 tgatggagagggtggaagtggttt 599
|||||| || ||||||||||||||
Sbjct: 76 tgatggggaaggtggaagtggttt 99
>gnl|LJGI|TC81621 similar to UniRef100_A7QDW0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1211
Score = 262 bits (132), Expect = 5e-69
Identities = 200/222 (90%), Gaps = 3/222 (1%)
Strand = Plus / Plus
Query: 993 agctctccaattgtcagtagcagatggcagtgaggactcaggaagccagtc---agacat 1049
||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||
Sbjct: 727 agctctccaattgtcagtagcagatggcacaaaggattcaggaagccagtcgtcagacat 786
Query: 1050 gagtaaattgttggcagatcagtcgtttgtatcttctatccttgcatcgcttcccggggt 1109
||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 787 gagtaaattgttggcagatcaatcttttgtatcttctatccttgcatcgcttccaggggt 846
Query: 1110 tgacccaaatgacccatctgtcaaagatttactggcctccatgcaaaatcagtctgaacc 1169
||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||
Sbjct: 847 tgacccaaatgacccttctgtcaaagatttactggcctccatgcaaaatcaatttgagcc 906
Query: 1170 ccaacagaagaatgaagacaagccaccaaatgaggaggagaa 1211
| |||||||||| ||||||||| || |||||||| ||||
Sbjct: 907 tgagaagaagaatgacgacaagccatcagatgaggagaagaa 948
Score = 91.7 bits (46), Expect = 1e-17
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 874 gatgagaatgctctactacagcaggcccttgctatgtcaatggatgatcctgtgattaac 933
||||||||||| ||||| |||||||| ||||| |||||||||||||| ||||||| || |
Sbjct: 5 gatgagaatgccctactccagcaggcacttgcaatgtcaatggatgaccctgtgagtagc 64
Query: 934 aaagatatgagagatacagatatgtctgaagcagctgcagatgatcctga 983
| ||| | | |||||| |||||||| |||||| |||||||||| |||||
Sbjct: 65 catgatgtaaaagatacggatatgtcagaagcacctgcagatgaccctga 114
>gnl|LJGI|TC67586 similar to UniRef100_A7QDW0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 589
Score = 117 bits (59), Expect = 2e-25
Identities = 95/107 (88%)
Strand = Plus / Plus
Query: 1105 ggggttgacccaaatgacccatctgtcaaagatttactggcctccatgcaaaatcagtct 1164
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 130 ggggttgacccaaatgacccttctgtcaaagatttactggcctccatgcaaaatcaatct 189
Query: 1165 gaaccccaacagaagaatgaagacaagccaccaaatgaggaggagaa 1211
|| || | |||||||||| || |||||| || |||||||| ||||
Sbjct: 190 gagcctgagaagaagaatgacgataagccatcagatgaggagaagaa 236
Score = 103 bits (52), Expect = 3e-21
Identities = 112/132 (84%)
Strand = Plus / Plus
Query: 318 gcagcaaaggattattgtctttactgggagtcctatcaagcacgagaagaaaatgttgga 377
||||||| ||||| |||| ||| |||| |||||| | ||||| || ||||||||| ||||
Sbjct: 1 gcagcaacggattgttgtttttgctggaagtcctgttaagcatgaaaagaaaatgctgga 60
Query: 378 gatgattgggcgaaagttgaaaaagaatagcgttgcacttgacattgtcaattttggtga 437
|||||| ||| | ||| ||||||||||||| || |||||||| ||| | |||||||||||
Sbjct: 61 gatgatagggaggaagctgaaaaagaatagtgtagcacttgatattattaattttggtga 120
Query: 438 agaagacgaggg 449
|||||| |||||
Sbjct: 121 agaagatgaggg 132