Miyakogusa Predicted Gene

Lj0g3v0280939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0280939.1 tr|H7FZU9|H7FZU9_9LACO Multimodular
transpeptidase-transglycosylase PBP 1A OS=Lactobacillus
salivari,31.43,3.2,seg,NULL,44445_g.1
         (222 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80313                                                      230   3e-60

>gnl|LJGI|TC80313 
          Length = 761

 Score =  230 bits (116), Expect = 3e-60
 Identities = 125/128 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaaatcagagaaacaaaacaatccgaatcaagcaacgagatgcaatcaagcaacagga 60
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgaaatcagagactcaaaacaatccgaatcaagcaacgagatgcaatcaagcaacagga 222

                                                                       
Query: 61  cacaaatcaaatcaaagaagaagaaacgattgcatcgaccaacgaatcaattgcagcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 221 cacaaatcaaatcaaagaagaagaaacgattgcatcgaccaacgaatcaatcgcagcaag 162

                   
Query: 121 acacaatc 128
           ||||||||
Sbjct: 161 acacaatc 154



 Score = 83.8 bits (42), Expect = 4e-16
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                     
Query: 160 ttgatcatccaatcgacgaatcaatcaacgaaatcgcggaag 201
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ttgatcatccaatcgacgaatcaatcaacgaaatcgcggaag 84