Miyakogusa Predicted Gene
- Lj0g3v0280799.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0280799.1 Non Chatacterized Hit- tr|B9SS94|B9SS94_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,58.82,0.00009,no description,NULL,gene.g21825.t1.1
(249 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74638 similar to UniRef100_A7QCA6 Cluster: Chromosome... 351 1e-96
gnl|LJGI|TC68970 weakly similar to UniRef100_Q69F85 Cluster: Gag... 143 6e-34
gnl|LJGI|GO018471 similar to UniRef100_A7QCA6 Cluster: Chromosom... 107 3e-23
>gnl|LJGI|TC74638 similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 614
Score = 351 bits (177), Expect = 1e-96
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 73 agttcggttggggcttcgttttgtttgtttatttcccgaaacaagatggtcagaacgaag 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agttcggttggggcttcgttttgtttgtttatttcccgaaacaagatggtcagaacgaag 131
Query: 133 aacaagagaaggaaggaagagaatatagctgaggattggtgctttgcttgcaaggatgga 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aacaagagaaggaaggaagagaatatagctgaggattggtgctttgcttgcaaggatgga 191
Query: 193 gggctcatgagggtgtgcgattataggacacggttgagaattgagatgaatgagtag 249
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gggctcatgagggtgtgcgattataggacacggttgagaattgagatgaatgagtag 248
>gnl|LJGI|TC68970 weakly similar to UniRef100_Q69F85 Cluster: Gag-pol polyprotein;
n=1; Phaseolus vulgaris|Rep: Gag-pol polyprotein -
Phaseolus vulgaris (Kidney bean) (French bean), partial
(4%)
Length = 571
Score = 143 bits (72), Expect = 6e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 atgggaattcagatgaggttctcatcagtgaagcatcctcaaactaatgggcagacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atgggaattcagatgaggttctcatcagtgaagcatcctcaaactaatgggcagacagag 118
Query: 61 gctgcgaacaag 72
||||||||||||
Sbjct: 119 gctgcgaacaag 130
>gnl|LJGI|GO018471 similar to UniRef100_A7QCA6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (14%)
Length = 741
Score = 107 bits (54), Expect = 3e-23
Identities = 125/148 (84%), Gaps = 3/148 (2%)
Strand = Plus / Plus
Query: 72 gagttcggttggggcttcgttttgtttgtttatttcccgaaacaagatggtcagaacgaa 131
||||| ||||| |||||| |||||||||||||||| | |||||||||||||||||| |||
Sbjct: 262 gagttaggttgaggcttcattttgtttgtttattttctgaaacaagatggtcagaaagaa 321
Query: 132 gaacaagagaaggaaggaagagaatatagctgaggattggtgctttgcttgcaaggatgg 191
|||||| | | |||||||||| || |||||||||||||| |||| |||| ||||||
Sbjct: 322 gaacaaaatgaagaaggaagag---attgctgaggattggtgttttgagtgcatggatgg 378
Query: 192 agggctcatgagggtgtgcgattatagg 219
||| ||||||||||||||||||||
Sbjct: 379 aggcaagttgagggtgtgcgattatagg 406
Score = 89.7 bits (45), Expect = 7e-18
Identities = 92/107 (85%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 112 aacaagatggtcagaacgaagaacaagagaaggaaggaagagaatatagctgaggattgg 171
||||||||||| ||||||||||||| || ||||||||| ||| | ||||||||||||
Sbjct: 93 aacaagatggttagaacgaagaacagaaggaggaaggaaaagatt---gctgaggattgg 149
Query: 172 tgctttgcttgcaaggatggagggctcatgagggtgtgcgattatag 218
|| |||| | ||||||| |||||||||||||||| |||||||||||
Sbjct: 150 tgttttgtgtacaaggatagagggctcatgagggtctgcgattatag 196