Miyakogusa Predicted Gene
- Lj0g3v0280329.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0280329.1 tr|G4YL70|G4YL70_PHYSP Ubiquitin
carboxyl-terminal hydrolase (Fragment) OS=Phytophthora sojae
(strai,30,9.5, ,CUFF.18641.1
(595 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS357538 535 e-151
gnl|LJGI|FS345205 similar to UniRef100_Q84WJ4 Cluster: At5g57100... 422 e-117
gnl|LJGI|FS346439 weakly similar to UniRef100_Q914B7 Cluster: Nu... 412 e-114
>gnl|LJGI|FS357538
Length = 584
Score = 535 bits (270), Expect = e-151
Identities = 377/411 (91%), Gaps = 5/411 (1%)
Strand = Plus / Minus
Query: 185 gtcgcctctatgtcggcagcgctacgatcacgggacgtgaccggcacgggaacgtcgtcg 244
||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct: 576 gtcgcctttatgtcggcagcgctacaattacgggacgtgaccgacacgggaacgtcgtcg 517
Query: 245 agacacagatcatggagtggggcaaggtcaagatgcccttcgcaccatgtcgcttcttgc 304
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 516 agacacagatcatggagtggggcaaggtcaagatgccctttgcaccatgccgcttcttgc 457
Query: 305 atccaggagatgagggttcttgctcgaactctccacagagggttgcaggaggggaggttt 364
|||||||||||||||||||||||||||||||||| || ||| |||||||| ||||| ||
Sbjct: 456 atccaggagatgagggttcttgctcgaactctcctcaatgggctgcaggagaggagggtt 397
Query: 365 cttcacgggcgttcggggcaccagattggtgggcacgcattggcgactttccagctccgc 424
||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 396 cttcacgggcgatcggggcaccagactggtgggcacgcattggcgactttccagttccgc 337
Query: 425 ctctagagtcccttccagttcctgctgagcctatggaggactttgctccacggtacgttg 484
||| |||||| |||||||||||| |||||| |||||||| ||||||||||||| |||||
Sbjct: 336 ctccagagtctcttccagttcctactgagcatatggagggttttgctccacggttcgttg 277
Query: 485 cagtagctgatgcacctagggatgtcgagacggaggggcatggagatgcaccagaggtca 544
||||||||| |||| ||| || |||||| ||||| |||||||||||||||||||||
Sbjct: 276 cagtagctg----acct-gggttgccgagacagagggtaatggagatgcaccagaggtca 222
Query: 545 gggctcctgtgaagaagcgccagagacagtgcggttggctcgacgagtgac 595
|| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 221 ggactcctgtgaagaaacgccagagacagtgcggttggctcgacgagtgac 171
>gnl|LJGI|FS345205 similar to UniRef100_Q84WJ4 Cluster: At5g57100; n=1; Arabidopsis
thaliana|Rep: At5g57100 - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 734
Score = 422 bits (213), Expect = e-117
Identities = 225/229 (98%)
Strand = Plus / Plus
Query: 89 agatggtgaaggtcaagagtgcagtggtctcgtggacgatagatttacatgatcagcaca 148
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 506 agatggtgaaggtcaagagtgcaatggtctcgtggacgatagatttacatgatcagcaca 565
Query: 149 aggacaacgcctggcagaccgactctgccaaggtacgtcgcctctatgtcggcagcgcta 208
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 566 aggacaacgcctggcagaccgactctcccaaggtacgtcgcctctatgtcggcagcgcta 625
Query: 209 cgatcacgggacgtgaccggcacgggaacgtcgtcgagacacagatcatggagtggggca 268
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 626 cgatcacgggacgtgaccggcacgagaacgtcgtcgagacacagatcatggagtggggca 685
Query: 269 aggtcaagatgcccttcgcaccatgtcgcttcttgcatccaggagatga 317
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aggttaagatgcccttcgcaccatgtcgcttcttgcatccaggagatga 734
>gnl|LJGI|FS346439 weakly similar to UniRef100_Q914B7 Cluster: Nucleoprotein; n=1;
Measles virus|Rep: Nucleoprotein - Measles virus,
partial (14%)
Length = 537
Score = 412 bits (208), Expect = e-114
Identities = 262/280 (93%)
Strand = Plus / Minus
Query: 316 gagggttcttgctcgaactctccacagagggttgcaggaggggaggtttcttcacgggcg 375
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 428 gagggttcgtgctcgaactctccacagaggattgcaggaggggaggtttcttcacgggcg 369
Query: 376 ttcggggcaccagattggtgggcacgcattggcgactttccagctccgcctctagagtcc 435
|||| |||||||||||||||||||||| || |||||||| |||||||||||| ||||||
Sbjct: 368 ttcgaggcaccagattggtgggcacgccgtgacgactttctagctccgcctctcgagtcc 309
Query: 436 cttccagttcctgctgagcctatggaggactttgctccacggtacgttgcagtagctgat 495
|||||| ||||||||||||||||||| | ||||||||||| ||| ||||||| |||||||
Sbjct: 308 cttccaattcctgctgagcctatggatgtctttgctccactgtatgttgcagcagctgat 249
Query: 496 gcacctagggatgtcgagacggaggggcatggagatgcaccagaggtcagggctcctgtg 555
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 248 gcacctagggatgccgagacggaggggcgtggagatgcaccagaggtcagggctcctgtg 189
Query: 556 aagaagcgccagagacagtgcggttggctcgacgagtgac 595
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 188 aagaagcgccagcgacagtgcagttggctcgacgagtgac 149