Miyakogusa Predicted Gene
- Lj0g3v0279609.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0279609.2 Non Chatacterized Hit- tr|I1NIU3|I1NIU3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5211
PE=,84.45,0,XRN_N,Putative 5-3 exonuclease; zf-CCHC,Zinc finger,
CCHC-type; no description,Zinc finger, CCHC-typ,CUFF.18603.2
(2043 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63057 similar to UniRef100_A7Q5V8 Cluster: Chromosome... 454 e-126
gnl|LJGI|TC68059 similar to UniRef100_A7NSX5 Cluster: Chromosome... 72 2e-11
>gnl|LJGI|TC63057 similar to UniRef100_A7Q5V8 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 711
Score = 454 bits (229), Expect = e-126
Identities = 430/497 (86%)
Strand = Plus / Plus
Query: 97 aaacccaaccccaacggcatggagttcgacaacctgtacctggacatgaacggcatcgtt 156
||||| || |||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 211 aaacctaatcccaacggcatggagttcgacaacttgtacttggacatgaacggcatcatc 270
Query: 157 cacccttgttttcaccctgatggcaagccagcacctgctacctatgatgatgtgttcaaa 216
|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
Sbjct: 271 cacccttgttttcaccctgatggcaagcaagcacctgctacctatgatgatgttttcaga 330
Query: 217 tccatatttgactatgttgaccatctcttctcgttggttcgtccaaggaagcttctctac 276
|| || |||||||| |||||||||||||| | |||||||| || ||||||||||| ||
Sbjct: 331 tcaatgtttgactacattgaccatctcttcgcattggttcgccctaggaagcttctttat 390
Query: 277 cttgcaattgatggtgttgcgccgagggccaaaatgaatcagcaacgttctcggcgtttc 336
|||||||||||||||||||| || | || ||||||||||||||||||||| |||||||
Sbjct: 391 cttgcaattgatggtgttgcaccacgagctaaaatgaatcagcaacgttctaggcgtttt 450
Query: 337 cgtgctgccaaggatgcagctgaggctgaagctgaagaggaaaggctcaggaaagaattt 396
|| ||||| || ||||| |||||||||||||||||| |||||||||| ||| ||||||||
Sbjct: 451 cgagctgcaaaagatgctgctgaggctgaagctgaaaaggaaaggcttaggcaagaattt 510
Query: 397 gagggcgagggaaatcttttatcgcctaaagaaaagactgagacttcagactcaaatgtc 456
||||| ||| | ||||| | | ||| ||| ||||||||| ||||||||||||
Sbjct: 511 gagggtgagatggaacttttgccttccctagacaagcctgagacttatgactcaaatgtc 570
Query: 457 attacccctggaactcaatttatggcagcactgtcggtggctcttcagtattatgtacaa 516
||||||||||| |||| ||||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 571 attacccctggcactccatttatggcagtgctgtcagtggctcttcagtattacatacaa 630
Query: 517 tctagattgaaccacaaccctggctggcagaaaataaaggttatacttactgattcaaat 576
||||||||||| ||||||||||||||| | | | ||||||||||||| || ||||||||
Sbjct: 631 actagattgaacaacaaccctggctggcggcatacaaaggttatactttctaattcaaat 690
Query: 577 gcacctggtgagggaga 593
| ||||||||||||||
Sbjct: 691 gttcctggtgagggaga 707
>gnl|LJGI|TC68059 similar to UniRef100_A7NSX5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 723
Score = 71.9 bits (36), Expect = 2e-11
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 263 ggaagcttctctaccttgcaattgatggtgttgcgccgagggccaaaatgaatcagcaac 322
||||||| |||||| | || ||||| ||||||||||||||||| || |||||||||||||
Sbjct: 373 ggaagctgctctacatggctattgacggtgttgcgccgagggctaagatgaatcagcaac 432
Query: 323 gttc 326
||||
Sbjct: 433 gttc 436