Miyakogusa Predicted Gene

Lj0g3v0279579.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0279579.1 Non Chatacterized Hit- tr|I1LFV3|I1LFV3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20053
PE,23.77,6e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.18599.1
         (1525 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75881 weakly similar to UniRef100_A7P3I7 Cluster: Chr...   668   0.0  

>gnl|LJGI|TC75881 weakly similar to UniRef100_A7P3I7 Cluster: Chromosome chr1
            scaffold_5, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (18%)
          Length = 551

 Score =  668 bits (337), Expect = 0.0
 Identities = 346/349 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1177 agtgagatggggtgtgagcctactgtgagcacttatgacatcattttgaggttgttttgt 1236
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1    agtgagatggggtgtgagcctactgtgagcacttatgacatcattttgaggatgttttgt 60

                                                                        
Query: 1237 gatgaggagagattggacatggaaatggcggtttgggatcagatgagagccaggggaatc 1296
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61   gatgaggagagattggacatggcaatggcggtttgggatcagatgagagccaggggaatc 120

                                                                        
Query: 1297 cttcctggaatgcatgtgttttttgtgttaatcagtgccttgtgccatgcaaataagttg 1356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cttcctggaatgcatgtgttttttgtgttaatcagtgccttgtgccatgcaaataagttg 180

                                                                        
Query: 1357 gatgcagcctgtaagtactttcaacaaatgttggatgttggtattcggcctcctgcaaac 1416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gatgcagcctgtaagtactttcaacaaatgttggatgttggtattcggcctcctgcaaac 240

                                                                        
Query: 1417 ttgtttagtaccttgaagcaagctctaattgatgcggggatggagactacagctatacat 1476
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241  ttgtttagtaccttgaagcaagctctaattgatgcggggatggagactacggctatacat 300

                                                             
Query: 1477 tttgctttgaaaattgataaactgaggaaaactccactagttgcttgac 1525
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  tttgctttgaaaattgataaactgaggaaaactccactagttgcttgac 349