Miyakogusa Predicted Gene

Lj0g3v0279519.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0279519.1 Non Chatacterized Hit- tr|I1KYP5|I1KYP5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,40.88,5e-19,no
description,DNA-binding pseudobarrel domain; B3,B3 DNA binding domain;
B3 DNA binding domain,B3 D,CUFF.18596.1
         (723 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Tr...   266   2e-70
gnl|LJGI|FS343023 similar to UniRef100_Q5D1M3 Cluster: Class III...   250   1e-65
gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Tra...   218   4e-56

>gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
           B3; n=1; Medicago truncatula|Rep: Transcriptional factor
           B3 - Medicago truncatula (Barrel medic), partial (20%)
          Length = 409

 Score =  266 bits (134), Expect = 2e-70
 Identities = 254/294 (86%)
 Strand = Plus / Plus

                                                                       
Query: 117 gaactcagcaacccgtttctttaggatcatcacactaccatgtcttgaagctggagagct 176
           |||||| |||| | ||||||||| ||||||||||  | ||||  ||||||||||| | ||
Sbjct: 116 gaactctgcaatctgtttctttaagatcatcacaacaacatgcattgaagctggaaaact 175

                                                                       
Query: 177 tattcttccaaatggtttcatgaagaaatacagtggtggcatgtcaaacccagtatttct 236
           ||  || |||||||||||||| ||||||||||||||||  ||| ||||||||||| ||||
Sbjct: 176 taagctcccaaatggtttcattaagaaatacagtggtgatatgccaaacccagtaattct 235

                                                                       
Query: 237 caaggcccctgataacattagttgggaggtacactggagcaaacatgattcatatttttg 296
           |||| |||||||||||| |||||||||| |||| ||||| |||||||||||  || ||||
Sbjct: 236 caagccccctgataacactagttgggagatacattggagtaaacatgattctgatatttg 295

                                                                       
Query: 297 gttccaaaagggttggaaagagtttgtgaaatattactcccttgatcatgagcacttggt 356
           ||| |||||||||||| |||| |||| |||||||||||||||  | |||| |||||||||
Sbjct: 296 gtttcaaaagggttgggaagaatttgcgaaatattactccctctaccatgggcacttggt 355

                                                                 
Query: 357 attgtttgaattcaaggatgcttctcattttagggtacacatatttgataagag 410
            |||||||||||||||||||||||||||||| |||| || |||||||| |||||
Sbjct: 356 tttgtttgaattcaaggatgcttctcattttggggtgcatatatttgacaagag 409



 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 8   ggcacttggttttatttgaattcaagggaccttctaagtttgaggtgcgtatatttgaca 67
           ||||||||||||| |||||||||||||   ||||| | |||| ||||| |||||||||||
Sbjct: 346 ggcacttggttttgtttgaattcaaggatgcttctcattttggggtgcatatatttgaca 405

              
Query: 68  aga 70
           |||
Sbjct: 406 aga 408


>gnl|LJGI|FS343023 similar to UniRef100_Q5D1M3 Cluster: Class III HD-Zip protein 4;
           n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 4
           - Populus trichocarpa (Western balsam poplar) (Populus
           balsamiferasubsp. trichocarpa), partial (4%)
          Length = 750

 Score =  250 bits (126), Expect = 1e-65
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 52  gtgcgtatatttgacaagaacgcccttgaaataaaataccttccacttagtaacaagcaa 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtgcgtatatttgacaagaacgcccttgaaataaaataccttccacttagtaacaagcaa 414

                                                                       
Query: 112 attccgaactcagcaacccgtttctttaggatcatcacactaccatgtcttgaagctgga 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attccgaactcagcaacccgtttctttaggatcatcacactaccatgtcttgaagctgga 474

                 
Query: 172 gagctt 177
           ||||||
Sbjct: 475 gagctt 480


>gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
           B3; n=1; Medicago truncatula|Rep: Transcriptional factor
           B3 - Medicago truncatula (Barrel medic), partial (24%)
          Length = 744

 Score =  218 bits (110), Expect = 4e-56
 Identities = 170/190 (89%)
 Strand = Plus / Plus

                                                                       
Query: 293 tttggttccaaaagggttggaaagagtttgtgaaatattactcccttgatcatgagcact 352
           ||||||| ||||| ||||||||||| |||| ||||||||||||||| ||||| |  ||| 
Sbjct: 275 tttggtttcaaaatggttggaaagattttgcgaaatattactccctcgatcacggacaca 334

                                                                       
Query: 353 tggtattgtttgaattcaaggatgcttctcattttagggtacacatatttgataagagta 412
           |||| |||||||||| ||||||| ||||||||||| ||||||| |||||||||||||| |
Sbjct: 335 tggtgttgtttgaatacaaggattcttctcattttggggtacatatatttgataagagca 394

                                                                       
Query: 413 cccttgaaatagaatatccttcaaatgagaatcaaggtgaagagcacaaccctgatcaga 472
           |||||||||||  |||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 395 cccttgaaataagatatccttcacatgagaatcaagatgaagagcacaaccctgatcaga 454

                     
Query: 473 ttggtgatga 482
           ||| ||||||
Sbjct: 455 ttgatgatga 464