Miyakogusa Predicted Gene
- Lj0g3v0278039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0278039.1 Non Chatacterized Hit- tr|I1M2W2|I1M2W2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.83,0,DUF92,Protein
of unknown function DUF92, TMEM19; seg,NULL; FAMILY NOT NAMED,Protein
of unknown funct,CUFF.18474.1
(972 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76261 similar to UniRef100_UPI000034F55F Cluster: int... 1122 0.0
gnl|LJGI|FS328066 similar to UniRef100_UPI000034F55F Cluster: in... 591 e-168
gnl|LJGI|TC76344 similar to UniRef100_UPI000034F55F Cluster: int... 396 e-109
>gnl|LJGI|TC76261 similar to UniRef100_UPI000034F55F Cluster: integral membrane
family protein; n=1; Arabidopsis thaliana|Rep: integral
membrane family protein - Arabidopsis thaliana, partial
(46%)
Length = 751
Score = 1122 bits (566), Expect = 0.0
Identities = 569/570 (99%)
Strand = Plus / Plus
Query: 97 aaactcaaatccccaattctcaaaccctgtcttcttcgccgcaacatgcaggcttcacgt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaactcaaatccccaattctcaaaccctgtcttcttcgccgcaacatgcaggcttcacgt 241
Query: 157 gccgccgccagcagcttccaagacgctgttggaggagccatggcgctgcttcaggcgacc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gccgccgccagcagcttccaagacgctgttggaggagccatggcgctgcttcaggcgacc 301
Query: 217 cccgccacgtggcaatcctctgtgctgagcaacctcttcatcttcctcgtgggttctccc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cccgccacgtggcaatcctctgtgctgagcaacctcttcatcttcctcgtgggttctccc 361
Query: 277 cttctggtcaccggcctgtccctctccggcatcgccgccgcttttctgctcggaacactc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cttctggtcaccggcctgtccctctccggcatcgccgccgcttttctgctcggaacactc 421
Query: 337 acttggcgtgcttttggcccttctggcttcttccttgtcgccacctatttcgtcattgga 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 acttggcgtgcttttggcccttctggcttcttccttgtcgccacctatttcgtcattgga 481
Query: 397 acagcggtcacgaaggtcaaaatggcacagaaaatggcccaggggattgcagagaaaaga 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acagcggtcacgaaggtcaaaatggcacagaaaatggcccaggggattgcagagaaaaga 541
Query: 457 aaaggaagaaggggtccgggcagtgttattggatccagtgctgctggttgcgtttttgct 516
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 542 aaaggaagaaggggtccgggcagtgttattggatccagtgctgctggttacgtttttgct 601
Query: 517 ttcctatcaatttatggagttgggggtgaggcttactttaggctttggagacttgggttt 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttcctatcaatttatggagttgggggtgaggcttactttaggctttggagacttgggttt 661
Query: 577 gttgccagtttctgtaccaagttgagtgacacagtctcaagtgaaatagggaaggcatat 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gttgccagtttctgtaccaagttgagtgacacagtctcaagtgaaatagggaaggcatat 721
Query: 637 ggaaaaacaacgtacttagtgacaacattc 666
||||||||||||||||||||||||||||||
Sbjct: 722 ggaaaaacaacgtacttagtgacaacattc 751
Score = 71.9 bits (36), Expect = 7e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atggcctattcaagtcgtgttcttcacgccaccgca 36
||||||||||||||||||||||||||||||||||||
Sbjct: 86 atggcctattcaagtcgtgttcttcacgccaccgca 121
>gnl|LJGI|FS328066 similar to UniRef100_UPI000034F55F Cluster: integral membrane
family protein; n=1; Arabidopsis thaliana|Rep: integral
membrane family protein - Arabidopsis thaliana, partial
(21%)
Length = 775
Score = 591 bits (298), Expect = e-168
Identities = 298/298 (100%)
Strand = Plus / Plus
Query: 97 aaactcaaatccccaattctcaaaccctgtcttcttcgccgcaacatgcaggcttcacgt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aaactcaaatccccaattctcaaaccctgtcttcttcgccgcaacatgcaggcttcacgt 205
Query: 157 gccgccgccagcagcttccaagacgctgttggaggagccatggcgctgcttcaggcgacc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gccgccgccagcagcttccaagacgctgttggaggagccatggcgctgcttcaggcgacc 265
Query: 217 cccgccacgtggcaatcctctgtgctgagcaacctcttcatcttcctcgtgggttctccc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cccgccacgtggcaatcctctgtgctgagcaacctcttcatcttcctcgtgggttctccc 325
Query: 277 cttctggtcaccggcctgtccctctccggcatcgccgccgcttttctgctcggaacactc 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cttctggtcaccggcctgtccctctccggcatcgccgccgcttttctgctcggaacactc 385
Query: 337 acttggcgtgcttttggcccttctggcttcttccttgtcgccacctatttcgtcattg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acttggcgtgcttttggcccttctggcttcttccttgtcgccacctatttcgtcattg 443
Score = 71.9 bits (36), Expect = 7e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atggcctattcaagtcgtgttcttcacgccaccgca 36
||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggcctattcaagtcgtgttcttcacgccaccgca 85
>gnl|LJGI|TC76344 similar to UniRef100_UPI000034F55F Cluster: integral membrane
family protein; n=1; Arabidopsis thaliana|Rep: integral
membrane family protein - Arabidopsis thaliana, partial
(15%)
Length = 652
Score = 396 bits (200), Expect = e-109
Identities = 221/227 (97%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 747 ctctgtcagttgtctcatcggtcaggttggtttacatgaagcaattata-tgtgtactag 805
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||
Sbjct: 1 ctctgtcagttgtctcatcggtcagnttggtttacatgaagcaattataatgtgtattag 60
Query: 806 cttcccagattgctaatcatggtgagagcataattagcgctgctcttcaagagaaggaac 865
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 cttcccagattgctaatcttggtgagagcataattggcgctgctcttcaagagaaggaag 120
Query: 866 ggtttcaatggcttaacaatgatgcagtcaatatcatcaacgtatccatgggcagtatca 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtttcaatggcttaacaatgatgcagtcaatatcatcaacgtatccatgggcagtatca 180
Query: 926 ccgcagtcttattgcagcaagcactccggagcttgcatccctaaatt 972
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgcagtcttattgcagcaagcactccggagcttgcatccctaaatt 227