Miyakogusa Predicted Gene
- Lj0g3v0277519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0277519.1 Non Chatacterized Hit- tr|I3S460|I3S460_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,66.67,0.000000002, ,CUFF.18429.1
(144 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343807 278 8e-75
gnl|LJGI|TC73575 similar to UniRef100_A7QK65 Cluster: Chromosome... 98 2e-20
gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyc... 92 1e-18
gnl|LJGI|TC69553 weakly similar to UniRef100_Q8L7H1 Cluster: F-b... 88 2e-17
gnl|LJGI|TC82244 76 6e-14
gnl|LJGI|TC77900 similar to UniRef100_A7QVU2 Cluster: Chromosome... 66 6e-11
gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosom... 54 2e-07
>gnl|LJGI|FS343807
Length = 619
Score = 278 bits (140), Expect = 8e-75
Identities = 143/144 (99%)
Strand = Plus / Plus
Query: 1 atgtttcccaatttaatttatctggagctctcagttggataccatgttaaatggagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 atgtttcccaatttaatttatctggagctctcagttggataccatgttaaatggagtgtg 117
Query: 61 gcgcttgatatgctcaatcattgccctaagcttcaaactgttgtctttgatttaactttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gcgcttgatatgctcaatcattgccctaagcttcaaactgttgtctttgatttaactttt 177
Query: 121 gatggtgaagatgatgtctggcca 144
||||||||||||||||| ||||||
Sbjct: 178 gatggtgaagatgatgtttggcca 201
>gnl|LJGI|TC73575 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 1447
Score = 97.6 bits (49), Expect = 2e-20
Identities = 82/93 (88%)
Strand = Plus / Plus
Query: 52 tggagtgtggcgcttgatatgctcaatcattgccctaagcttcaaactgttgtctttgat 111
|||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 907 tggagtttggccctcgatatgctcaatcattgccctaagcttcatactgttgtctttgat 966
Query: 112 ttaacttttgatggtgaagatgatgtctggcca 144
|| |||| || || | || ||||||| ||||||
Sbjct: 967 ttgacttatgttgataaatatgatgtttggcca 999
>gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD;
Zinc finger, FYVE/PHD-type; n=1; Medicago truncatula|Rep:
Cyclin-like F-box; FBD; Zinc finger, FYVE/PHD-type -
Medicago truncatula (Barrel medic), partial (19%)
Length = 1534
Score = 91.7 bits (46), Expect = 1e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 53 ggagtgtggcgcttgatatgctcaatcattgccctaagcttcaaactgttgtctttga 110
|||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||
Sbjct: 1045 ggagtgtggcgcttgatatgctcaatcactgccctaagcttcagacttttgtctttga 1102
>gnl|LJGI|TC69553 weakly similar to UniRef100_Q8L7H1 Cluster: F-box/LRR-repeat protein
At4g14103; n=1; Arabidopsis thaliana|Rep:
F-box/LRR-repeat protein At4g14103 - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 1557
Score = 87.7 bits (44), Expect = 2e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 47 ttaaatggagtgtggcgcttgatatgctcaatcattgccctaagcttcaaactgttgtct 106
||||||||| | ||| ||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 1019 ttaaatggaatttggtgcttgatatgctcaatcattgtcctaagcttcaaacggttgtct 1078
Query: 107 ttga 110
||||
Sbjct: 1079 ttga 1082
>gnl|LJGI|TC82244
Length = 527
Score = 75.8 bits (38), Expect = 6e-14
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 59 tggcgcttgatatgctcaatcattgccctaagcttcaaactgttgt 104
||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 22 tggcgcttgatatgctcaatcgttgctctaagcttcaaactgttgt 67
>gnl|LJGI|TC77900 similar to UniRef100_A7QVU2 Cluster: Chromosome chr7
scaffold_192, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_192, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (9%)
Length = 523
Score = 65.9 bits (33), Expect = 6e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 55 agtgtggcgcttgatatgctcaatcattgccctaagcttca 95
|||||||| |||||||||||||||| |||||||||||||||
Sbjct: 59 agtgtggcacttgatatgctcaatccttgccctaagcttca 99
>gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 812
Score = 54.0 bits (27), Expect = 2e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 2 tgtttcccaatttaatttatctggagctctcagttggataccatgttaaatggagtgtgg 61
|||||||||||||||||||| ||||||||| | ||||| | | |||||| ||| |||
Sbjct: 742 tgtttcccaatttaatttatttggagctcttatttggaggctctattaaattcagtttgg 801
Query: 62 cgcttgatatg 72
|||||||||||
Sbjct: 802 cgcttgatatg 812