Miyakogusa Predicted Gene

Lj0g3v0277309.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0277309.1 Non Chatacterized Hit- tr|D8S279|D8S279_SELML
Putative uncharacterized protein SmMTP12 (Fragment)
OS,26.53,0.00000000000004,Multidrug resistance efflux transporter
EmrE,NULL; EamA,Drug/metabolite transporter,CUFF.18405.1
         (1080 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597283 similar to UniRef100_A7PAR4 Cluster: Chromosom...   587   e-167
gnl|LJGI|AV775128 similar to UniRef100_A7PAR4 Cluster: Chromosom...   496   e-139

>gnl|LJGI|DC597283 similar to UniRef100_A7PAR4 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 382

 Score =  587 bits (296), Expect = e-167
 Identities = 299/300 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgtccccaaaccatttgtcagaggatcgaggagggccttctcatcatcatttcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  atgatgtccccaaaccatttgtcagaggatcgaggagggccttctcatcatcatttcaga 142

                                                                       
Query: 61  cacacacccttccagataattcatactgctgcaaatttcatgaggatatggtcaatatac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 cacacacccttccagataattcatactgctgcaaatttcatgaggatatggtcaatatac 202

                                                                       
Query: 121 tccatgtaccgctacttataccagactggagcttcagttgttctatttctgtttgcctgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tccatgtaccgctacttataccagactggagcttcagttgttctatttctgtttgcctgc 262

                                                                       
Query: 181 cttgccccaacagcgatcatatttttagttttgcaaaagccttggaagggaaggccactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttgccccaacagcgatcatatttttagttttgcaaaagccttggaagggaaggccactt 322

                                                                       
Query: 241 tctaatacgcagattgtgccatctataataaatggctttataacagcactgtatctggtc 300
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 323 tctaatacgcagattgtgccatctataataaatggctttataacaccactgtatctggtc 382


>gnl|LJGI|AV775128 similar to UniRef100_A7PAR4 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 525

 Score =  496 bits (250), Expect = e-139
 Identities = 481/525 (91%), Gaps = 31/525 (5%)
 Strand = Plus / Minus

                                                                       
Query: 45  tcatcatcatttcagacacacacccttccagataattcatactgctgcaaatttcatgag 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcatcatcatttcagacacacacccttccagataattcatactgctgcaaatttcatgag 466

                                                                       
Query: 105 gatatggtcaatatactccatgtaccgctacttataccagactggagcttcagttgttct 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gatatggtcaatatactccatgtaccgctacttataccagactggagcttcagttgttct 406

                                                                       
Query: 165 atttctgt-ttgcctgc-cttgcccc--aacagcg-atcatatt-tttagttttgc---a 215
           |||||| | |||||||| |||||||   | ||||| |||||||| ||||||||||    |
Sbjct: 405 atttctatattgcctgcacttgccctctaccagcgcatcatattatttagttttggctta 346

                                                                       
Query: 216 aaagccttggaa-gggaaggc-cactttc-taata-cgcagat-tgtgccatc-tataat 269
           |   |||||||| |||||||| ||||||| ||||| ||||||| ||||||||| ||||||
Sbjct: 345 acgcccttggaacgggaaggcgcactttcctaatatcgcagatctgtgccatcctataat 286

                                                                       
Query: 270 a-aatgg-ctttataa-cagcac-tgta-tctggt-cttgt-ggggaaaggg--actgaa 320
           | ||||| |||||||| |||||| |||| |||||| ||||| ||||||||||  ||||||
Sbjct: 285 ataatggactttataatcagcacctgtactctggttcttgttggggaaaggggaactgaa 226

                                                                       
Query: 321 atca-tgtgga-ccagtta-gagcactattgg--ctgagtatt-ccggtgc-tgtccttg 373
           |||| |||||| ||||||| |||||||||| |  ||||||||  ||||||| ||||||||
Sbjct: 225 atcaatgtggatccagttacgagcactattcggtctgagtatgaccggtgcctgtccttg 166

                                                                       
Query: 374 gagtactttctgcagtgttgtatggtaggagaagccatctgttgaaaaagataggtggcc 433
           |||||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||
Sbjct: 165 gagtactttctgcagtcttgtatggtaggagaagccatctcctgaaaaagatagatggcc 106

                                                                       
Query: 434 taattgccatgctggcatctttatacttgctatctgaaggatgggctatggcaacatatt 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 taattgccatgctggcatctttatacttgctatctgaaggatgggctatggcaacatatt 46

                                                        
Query: 494 ctccattctcttgggaagatagagatgattcagaggttcagactg 538
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  ctccattctcttgggaagatagagatgattcagaggttcagactg 1