Miyakogusa Predicted Gene
- Lj0g3v0277169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0277169.1 tr|B9HSR3|B9HSR3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_770235 PE=4
SV=1,27.36,0.00003,seg,NULL; no description,DNA-binding pseudobarrel
domain; DNA-binding pseudobarrel domain,DNA-bindin,CUFF.18421.1
(408 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77857 793 0.0
gnl|LJGI|TC77934 694 0.0
>gnl|LJGI|TC77857
Length = 1198
Score = 793 bits (400), Expect = 0.0
Identities = 406/408 (99%)
Strand = Plus / Plus
Query: 1 atgcatcagtacaccttaagaagttctaagtctaagcaacagatttttgccagagtattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atgcatcagtacaccttaagaagttctaagtctaagcaacagatttttgccagagtattt 342
Query: 61 catccggaggaggtgtatattgttgtaccaagacaattcttgaatgattttgaagaaagt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 catcaggaggaggtgtatattgttgtaccaagacaattcttgaatgattttgaagaaagt 402
Query: 121 ctctctaaatatgttgaattagtggatcctgtagggaataaattatgtgttagcttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctctctaaatatgttgaattagtggatcctgtagggaataaattatgtgttagcttttat 462
Query: 181 tttgatcgtgatgaaccaagatttggtgctaatatttcagagttacgaactgtgcaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttgatcgtgatgaaccaagatttggtgctaatatttcagagttacgaactgtgcaccaa 522
Query: 241 atacagggaagtgtgataatttgttttatttatcttggtgatagtagatttgacatccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atacagggaagtgtgataatttgttttatttatcttggtgatagtagatttgacatccaa 582
Query: 301 attagtgatctgaacttgtttgagattgagtataggaaaagaactgctcatgttgcagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 attagtgatctgaacttgtttgagattgagtataggaaaagaactgctcatgttgcagct 642
Query: 361 aatgttgcaagttcaagtcatatgaattttcatgaagtagatggttcg 408
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 643 aatgttgcaagttcaagtcatctgaattttcatgaagtagatggttcg 690
>gnl|LJGI|TC77934
Length = 633
Score = 694 bits (350), Expect = 0.0
Identities = 399/410 (97%), Gaps = 4/410 (0%)
Strand = Plus / Plus
Query: 1 atgcatcagtacaccttaagaagttctaagtctaagcaacagatttttgccagagta-tt 59
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 221 atgcatcagtacaccttcagaagttctaagtctaagcaacaggtttttgccagagtactt 280
Query: 60 tcatccggaggaggtgtatattgttgtaccaagacaattcttgaatgattttgaagaaag 119
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 281 tcatccggatgaggtgtatattgttgtacccagacaattcttgaatgattttgaagaaag 340
Query: 120 tctctctaaatatgttgaattagtggatcctgtagggaataaattatgtgttagctttta 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 341 tctctctaaatatgttgaattagtggatcctgtagggaataaattctgtgttagctttta 400
Query: 180 ttttgatcgtgatgaaccaagatttggtgctaatatttcagagttacgaactgtgca-cc 238
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 401 ttttgatcgtgatgaacccagatttggtgctaatatttcagagttacgaactgtgcaccc 460
Query: 239 aaatacagggaagtgtgataatttgttttatttatcttggtgatagtagatttgacatcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaatacagggaagtgtgataatttgttttatttatcttggtgatagtagatttgacatcc 520
Query: 299 aaattagtgatctgaacttgtttgagattgagtataggaaaagaactgctcatgttgcag 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 caattagtgatctgaacttgtttgagattgagtataggaaaagaactgctcatgttgcag 580
Query: 359 ctaatgttgcaagttcaagtcatatgaattttcatgaagtagatggttcg 408
|||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 581 ctaatgttgc-agttc-agtcatatgaattttcatgaagtagatggttcg 628