Miyakogusa Predicted Gene

Lj0g3v0277059.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0277059.1 Non Chatacterized Hit- tr|A5BWP1|A5BWP1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.29,2e-18,B3,B3 DNA binding domain; no description,DNA-binding
pseudobarrel domain; B3 DNA binding domain,B3 D,CUFF.18382.1
         (1785 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV770380                                                     595   e-169

>gnl|LJGI|AV770380 
          Length = 526

 Score =  595 bits (300), Expect = e-169
 Identities = 357/372 (95%), Gaps = 3/372 (0%)
 Strand = Plus / Minus

                                                                       
Query: 538 gatgtttgcacctttgagctcattgctaagactaataacaccttccaggttcacatcttt 597
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gatgtttgcaccttcgagctcattgctaagactaataacaccttccaggttcacatcttt 467

                                                                       
Query: 598 agagagtcagacaatgcaagttgctcaacatctcaagtttcagatctcagagcagggcag 657
           |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 466 agagagtcagaccatgccagttgctcgacatctcaagtttcagatctcagagcagggccg 407

                                                                       
Query: 658 aagagagaagctaacttgttatcagagtctcttcgcccatgtaaagtgggaaggagtaga 717
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aagagagaagctaacttgttatcagagtctcttcgcccatgtaaagtgggaaggagtaga 347

                                                                       
Query: 718 tgtgctagagttggaaattccttgaa-gttgcaaaagggggcatcgtccagta-ctgaca 775
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||
Sbjct: 346 tgtgctagagttggaaattccttgaaccttgcaaaagggggcatcgtccagtacccgaca 287

                                                                       
Query: 776 aaaagtgcctaggaaaagaagggattacagccaaacaagttactgctcttgacagagcaa 835
           ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| |
Sbjct: 286 aaaagtgcctaggcaaagaagggattacagcccaacacgttactgctcttgacagagcca 227

                                                                       
Query: 836 ga-tctttcaaaatttgcaatccatcagtcctgattttcatgtatccgtcatatattatc 894
           || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gactctttcaaactttgcaatccatcagtcctgattttcatgtatccgtcatatattatc 167

                       
Query: 895 catggtcagctg 906
           ||||||||||||
Sbjct: 166 catggtcagctg 155



 Score =  260 bits (131), Expect = 3e-68
 Identities = 292/342 (85%), Gaps = 9/342 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1096 gatgtttgctcctttgagctcattgccaagacttgtaacaccttccaggttcacatcttt 1155
            ||||||||| |||| ||||||||||| ||||||  |||||||||||||||||||||||||
Sbjct: 526  gatgtttgcaccttcgagctcattgctaagactaataacaccttccaggttcacatcttt 467

                                                                        
Query: 1156 agagagtcagacaatgcaaattgtccaacatctcaag------atatcagaggagggata 1209
            |||||||||||| |||| | |||  | ||||||||||      || |||||| ||||   
Sbjct: 466  agagagtcagaccatgccagttgctcgacatctcaagtttcagatctcagagcagggccg 407

                                                                        
Query: 1210 aagagaaaagctaacttgtcatcagagtctcttcaaccatgtaaagtgggaaggagtaga 1269
            |||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||
Sbjct: 406  aagagagaagctaacttgttatcagagtctcttcgcccatgtaaagtgggaaggagtaga 347

                                                                        
Query: 1270 tgtgctaaagttggaaattccttgaa-attgaaaaagggggcatcgttcagta-cagaca 1327
            ||||||| ||||||||||||||||||  ||| ||||||||||||||| ||||| | ||||
Sbjct: 346  tgtgctagagttggaaattccttgaaccttgcaaaagggggcatcgtccagtacccgaca 287

                                                                        
Query: 1328 aaaggtgccaaggaaaacaagtgattgctgccaaacaagttacagctcttgacagagcaa 1387
            ||| ||||| ||| ||| ||| |||| | ||| |||| ||||| |||||||||||||| |
Sbjct: 286  aaaagtgcctaggcaaagaagggattacagcccaacacgttactgctcttgacagagcca 227

                                                      
Query: 1388 g-ctctttcaaaacttgtaatccatccttcctgattttcatg 1428
            | ||||||||||  ||| ||||||||  ||||||||||||||
Sbjct: 226  gactctttcaaactttgcaatccatcagtcctgattttcatg 185



 Score = 81.8 bits (41), Expect = 1e-14
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1651 gatgtttgcacttttgagctcattgttagcactaataacacgttcctagttcacatcttt 1710
            ||||||||||| || |||||||||| ||  ||||||||||| ||||  ||||||||||||
Sbjct: 526  gatgtttgcaccttcgagctcattgctaagactaataacaccttccaggttcacatcttt 467

                             
Query: 1711 agagagtcagacaatgc 1727
            |||||||||||| ||||
Sbjct: 466  agagagtcagaccatgc 450



 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 67/78 (85%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                       
Query: 274 gttacagctcttgaaagagcaag-ctctttcaaaatttgtaatccgtccttcctgatttt 332
           ||||| |||||||| ||||| || |||||||||| |||| ||||| ||  ||||||||||
Sbjct: 248 gttactgctcttgacagagccagactctttcaaactttgcaatccatcagtcctgatttt 189

                             
Query: 333 catgcatccctcatatat 350
           |||| |||| ||||||||
Sbjct: 188 catgtatccgtcatatat 171