Miyakogusa Predicted Gene
- Lj0g3v0276309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0276309.1 Non Chatacterized Hit- tr|K4CP84|K4CP84_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.73,1e-18,seg,NULL,CUFF.18370.1
(909 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73384 similar to UniRef100_A7NSQ0 Cluster: Chromosome... 1084 0.0
gnl|LJGI|TC66830 weakly similar to UniRef100_Q7PC52 Cluster: Chi... 385 e-106
gnl|LJGI|BI419806 similar to UniRef100_A7NSQ0 Cluster: Chromosom... 60 3e-08
>gnl|LJGI|TC73384 similar to UniRef100_A7NSQ0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 725
Score = 1084 bits (547), Expect = 0.0
Identities = 562/567 (99%)
Strand = Plus / Plus
Query: 1 atggttgatcaaaattctgatcaacccacaatttcttttccaatttctgatggaacagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggttgatcaaaattctgatcaacccacaatttcttttccaatttctgatggaacagga 218
Query: 61 caacaaaaacctcaaaagatgcaaacattcggagctaccaacattggtgttttgggttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 219 caacaaaaacctcaaaagatgcaaacattcggagctaccaacattggtgttttggattca 278
Query: 121 aacaaaatcccgacaacctacgagaacattctcagcatgaacgatgtgggactaggagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aacaaaatcccgacaacctacgagaacattctcagcatgaacgatgtgggactaggagtg 338
Query: 181 caattcagaccagaatcgaaggcggtgggagatgaatctggtatctgttcacctcctcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caattcagaccagaatcgaaggcggtgggagatgaatctggtatctgttcacctcctcta 398
Query: 241 tggtccagaactccaccaaggagtcccaatcatgggaaacactactatcgaagcctttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tggtccagaactccaccaaggagtcccaatcatgggaaacactactatcgaagcctttcc 458
Query: 301 cctgcgtccaagacacaagccattgataggggacagagagagctcatggcaatggttcgg 360
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 459 cctgcgtccaagacacaagccattgaaaggggacagagagagctcatggaaatggttcgg 518
Query: 361 ggcctgcctgagtcgaattacgagcttactctgaaagatcttgtggagcatcaaagggtt 420
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggcatgcctgagacgaattacgagcttactctgaaagatcttgtggagcatcaaagggtt 578
Query: 421 gttgctggtggtggtgttggggaatcagaaggtagcaaattgggggagaaaaaattgagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gttgctggtggtggtgttggggaatcagaaggtagcaaattgggggagaaaaaattgagc 638
Query: 481 agcaacaaaaatgtgcagaagaaggaaaagggtagtagcagaaaagttgatagcaacaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agcaacaaaaatgtgcagaagaaggaaaagggtagtagcagaaaagttgatagcaacaag 698
Query: 541 gggcagcaggtgaagagaagtgggaat 567
|||||||||||||||||||||||||||
Sbjct: 699 gggcagcaggtgaagagaagtgggaat 725
>gnl|LJGI|TC66830 weakly similar to UniRef100_Q7PC52 Cluster: Chitinase A; n=1;
Saccharophagus degradans 2-40|Rep: Chitinase A -
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM
17024), partial (9%)
Length = 690
Score = 385 bits (194), Expect = e-106
Identities = 194/194 (100%)
Strand = Plus / Plus
Query: 601 tttccaatttctttgggatctaagctgaaaaagaataagaagatggagcaattggcaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttccaatttctttgggatctaagctgaaaaagaataagaagatggagcaattggcaaat 253
Query: 661 agtaatagttcaagggtgtctcctagaacatcggtttctgataaggattggtggaagaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agtaatagttcaagggtgtctcctagaacatcggtttctgataaggattggtggaagaag 313
Query: 721 agcctctcagcttctggtggagagagtgagagtggtgtgtctagtgtcaatagtggtagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 agcctctcagcttctggtggagagagtgagagtggtgtgtctagtgtcaatagtggtagc 373
Query: 781 ttgaaaagttctgg 794
||||||||||||||
Sbjct: 374 ttgaaaagttctgg 387
Score = 127 bits (64), Expect = 1e-28
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 846 tgaaatgagtgctagtagttgctggcctttcattcgaagaccggaaagcctttcacaaaa 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgaaatgagtgctagtagttgctggcctttcattcgaagaccggaaagcctttcacaaaa 498
Query: 906 ataa 909
||||
Sbjct: 499 ataa 502
Score = 95.6 bits (48), Expect = 5e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1 atggttgatcaaaattctgatcaacccacaatttcttttccaatttct 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggttgatcaaaattctgatcaacccacaatttcttttccaatttct 205
>gnl|LJGI|BI419806 similar to UniRef100_A7NSQ0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 448
Score = 60.0 bits (30), Expect = 3e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 317 aagccattgataggggacagagagagctcatggcaatggttcggggcctgcctgagtcga 376
||||||||| || || |||||||||||||||| |||||||||| | |||| || || |
Sbjct: 217 aagccattgtcagaggccagagagagctcatggaaatggttcggaacatgcccgaatcaa 276
Query: 377 attacgagcttactctgaaagatcttgtggagcatcaa 414
| || ||||| ||||||| ||||| ||||||||||||
Sbjct: 277 actatgagctctctctgaaggatctcgtggagcatcaa 314