Miyakogusa Predicted Gene
- Lj0g3v0275819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0275819.1 Non Chatacterized Hit- tr|I3SST4|I3SST4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.97,0,seg,NULL;
LDL receptor-like module,Low-density lipoprotein (LDL) receptor class
A repeat; N-LINKED O,CUFF.18291.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023614 similar to UniRef100_A7PJC8 Cluster: Chromosom... 989 0.0
gnl|LJGI|DC598085 similar to UniRef100_A7P0C1 Cluster: Chromosom... 58 6e-08
>gnl|LJGI|GO023614 similar to UniRef100_A7PJC8 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 695
Score = 989 bits (499), Expect = 0.0
Identities = 555/575 (96%), Gaps = 3/575 (0%)
Strand = Plus / Plus
Query: 1 atggactcgcatagcttcctatgtttccactccgcatgtcttcttctcttcgcttccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggactcgcatagcttcctatgtttccactccgcatgtcttcttctcttcgcttccacc 142
Query: 61 gcaggttgtctttcacacccttccctccttggcgttcaccctttagatgagaaatattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gcaggttgtctttcacacccttccctccttggcgttcaccctttagatgagaaatattat 202
Query: 121 ggctctgaggtgatcaagtgcaaggatggatcaaaatccttctcaagagaccgcatcaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 203 ggctctgaggtgatcaagtgcaaggatggatcaaaatccttctcaagagaccacatcaat 262
Query: 181 gacaatttctgtgactgtcctgatggcactgatgaacctggaacttcagcttgccccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gacaatttctgtgactgtcctgatggcactgatgaacctggaacttcagcttgccccaaa 322
Query: 241 ggaaagttttattgcaaaaacctaggaagcaagccacagttcatattttcttctcatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaaagttttattgcaaaaacctaggaagcaagccacagttcatattttcttctcatgtt 382
Query: 301 aatgataatttttgcgattgttgtgatgggagtgatgaatatgatggaactattcattgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aatgataatttttgcgattgttgtgatgggagtgatgaatatgatggaactattcattgc 442
Query: 361 cctaacacatgtgtcatgggcgggaattctgagtacatgattggcaattacaataagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctaacacatgtgtcatgggcgggaattctgagtacatgattggcaattacaataagaaa 502
Query: 421 gtaagtggttttgctgnnnnnnnnnnnnnnnntggagtgaagtcaggggaatccgttcgt 480
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 503 gtaagtggttttgctgaaaaagaaacaaaaaatggagtgaagtcaggggaatccgttcgt 562
Query: 481 aaccttactggtttgaagttggctattattctacaagtggttctggtcatttttctatta 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 563 aaccttactggtttgaagttggcta-tattctacaagtggttctggtcatttttctatta 621
Query: 541 cttctctggagttttcgctttacaagatctagaag 575
||||||||||| ||||||||||| |||||||||||
Sbjct: 622 cttctctggag-tttcgctttac-agatctagaag 654
>gnl|LJGI|DC598085 similar to UniRef100_A7P0C1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 551
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 311 tttgcgattgttgtgatgggagtgatgaatatgatgg 347
||||||||||||||||||| | |||||||||||||||
Sbjct: 435 tttgcgattgttgtgatggaactgatgaatatgatgg 471