Miyakogusa Predicted Gene
- Lj0g3v0275799.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0275799.1 tr|G9K466|G9K466_MUSPF Hect domain and RLD 5
(Fragment) OS=Mustela putorius furo PE=2
SV=1,36.25,3e-18,RCC1_3,Regulator of chromosome condensation, RCC1;
RCC1,Regulator of chromosome condensation, RCC1;
,NODE_22055_length_1141_cov_193.793167.path2.1
(537 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79551 1065 0.0
gnl|LJGI|AV779820 similar to UniRef100_A7P456 Cluster: Chromosom... 184 4e-46
gnl|LJGI|TC78899 similar to UniRef100_A7P456 Cluster: Chromosome... 184 4e-46
>gnl|LJGI|TC79551
Length = 2230
Score = 1065 bits (537), Expect = 0.0
Identities = 537/537 (100%)
Strand = Plus / Plus
Query: 1 atgttaaaccttcaacctatggttgttgcagctggtgcttggcatgctgctgtggtaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 atgttaaaccttcaacctatggttgttgcagctggtgcttggcatgctgctgtggtaggg 1458
Query: 61 aaggatggccgtgtttgcacatggggatggggtcgatatggttgcttggggcatgggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 aaggatggccgtgtttgcacatggggatggggtcgatatggttgcttggggcatgggaat 1518
Query: 121 gaagattgtgaatctgtacctaaggtagtggaagcattgactaatgtcaaagcggtttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 gaagattgtgaatctgtacctaaggtagtggaagcattgactaatgtcaaagcggtttat 1578
Query: 181 gttgcaacaggagactacacaacatttgtagtgtctgatgatggtgatgtgtactcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 gttgcaacaggagactacacaacatttgtagtgtctgatgatggtgatgtgtactcattt 1638
Query: 241 gggtgtggggaatctgctagtctcgggcataatgctggaaatgatgtacagggaaacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 gggtgtggggaatctgctagtctcgggcataatgctggaaatgatgtacagggaaacaga 1698
Query: 301 catgcaaatgtgttaagtccacagcttgtgacttcactgaaacagatcaatgaaagggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1699 catgcaaatgtgttaagtccacagcttgtgacttcactgaaacagatcaatgaaagggtg 1758
Query: 361 gtgcagattagcctgaccaattccatatactggaatgctcacacctttgcactcactgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 gtgcagattagcctgaccaattccatatactggaatgctcacacctttgcactcactgaa 1818
Query: 421 tcagggaagctgtatgcatttggggctggagacaaaggacagttaggaattgagcttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 tcagggaagctgtatgcatttggggctggagacaaaggacagttaggaattgagcttgtt 1878
Query: 481 gaaaaccagactgaaagggggaatccagaacgcgttgacattgatcttggttaactg 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 gaaaaccagactgaaagggggaatccagaacgcgttgacattgatcttggttaactg 1935
>gnl|LJGI|AV779820 similar to UniRef100_A7P456 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 561
Score = 184 bits (93), Expect = 4e-46
Identities = 151/161 (93%), Gaps = 7/161 (4%)
Strand = Plus / Minus
Query: 226 gatgtgtactcatttgggtgtggggaatctgctagtctcgggcataatgctggaaatgat 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatgtgtactcatttgggtgtggggaatctgctagtctcgggcataatgctggaaatgat 502
Query: 286 gtacagggaaacagacatgcaaatgtgttaagtcc-acagcttgtgacttca-ctgaaac 343
|||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 501 gtacagggaaacagacatgccaatgtgttaagtccnacagcttgtgacttcagctgaaac 442
Query: 344 -agatc-aatgaaag-ggtggtgc-agat-tagcctgacca 379
||||| |||||||| |||||||| |||| |||||||||
Sbjct: 441 cagatccaatgaaagaggtggtgccagattacgcctgacca 401
>gnl|LJGI|TC78899 similar to UniRef100_A7P456 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 485
Score = 184 bits (93), Expect = 4e-46
Identities = 103/107 (96%)
Strand = Plus / Plus
Query: 431 tgtatgcatttggggctggagacaaaggacagttaggaattgagcttgttgaaaaccaga 490
|||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 1 tgtatgcatttgggnctggagacnaagcacagttaggaattgagcttgttgaaaaccaga 60
Query: 491 ctgaaagggggaatccagaacgcgttgacattgatcttggttaactg 537
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ctgaaagggggaatccagaacgcgttgacattggtcttggttaactg 107