Miyakogusa Predicted Gene

Lj0g3v0275659.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0275659.2 Non Chatacterized Hit- tr|Q69KN1|Q69KN1_ORYSJ
Putative SMA-9 class B OS=Oryza sativa subsp.
japonica,27.41,0.000004,seg,NULL,CUFF.18278.2
         (1398 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052353                                                     400   e-111

>gnl|LJGI|BP052353 
          Length = 452

 Score =  400 bits (202), Expect = e-111
 Identities = 202/202 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1197 cagtttgagtagacccgtatattacgtgttcttaaacaccctatccaagtccaacaaact 1256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452  cagtttgagtagacccgtatattacgtgttcttaaacaccctatccaagtccaacaaact 393

                                                                        
Query: 1257 ttacgagcatctacttagcaaaaaactgtgcgcgaaaattgatttctcacatcaatcgtt 1316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392  ttacgagcatctacttagcaaaaaactgtgcgcgaaaattgatttctcacatcaatcgtt 333

                                                                        
Query: 1317 gattttgtccccaacagaaaagaaatacttcttccttggttcagtttttcctagagggac 1376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332  gattttgtccccaacagaaaagaaatacttcttccttggttcagtttttcctagagggac 273

                                  
Query: 1377 aacatttgtggaacctcgttaa 1398
            ||||||||||||||||||||||
Sbjct: 272  aacatttgtggaacctcgttaa 251