Miyakogusa Predicted Gene
- Lj0g3v0275609.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0275609.1 tr|D7L6T3|D7L6T3_ARALL Proton-dependent
oligopeptide transport family protein OS=Arabidopsis lyrata
,43.14,1e-17,NITRATE TRANSPORTER (NTL1),NULL; OLIGOPEPTIDE
TRANSPORTER-RELATED,Proton-dependent oligopeptide tran,CUFF.18272.1
(1755 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61365 similar to UniRef100_O81393 Cluster: Nitrate tr... 383 e-105
gnl|LJGI|BG662103 similar to UniRef100_A7Q2R3 Cluster: Chromosom... 276 4e-73
gnl|LJGI|TC79008 similar to UniRef100_A7QI45 Cluster: Chromosome... 82 1e-14
>gnl|LJGI|TC61365 similar to UniRef100_O81393 Cluster: Nitrate transporter NTL1; n=1;
Arabidopsis thaliana|Rep: Nitrate transporter NTL1 -
Arabidopsis thaliana (Mouse-ear cress), partial (38%)
Length = 750
Score = 383 bits (193), Expect = e-105
Identities = 534/647 (82%), Gaps = 3/647 (0%)
Strand = Plus / Plus
Query: 70 agaggctgccatggcggcatgctcgcagcctcctttgttttggtggtggagatattggag 129
|||||| ||||||| |||||||| ||||||||||| ||| ||| |||||||| |||||
Sbjct: 105 agaggcagccatggaggcatgcttgcagcctccttcgttctgggtgtggagattttggaa 164
Query: 130 aatcttgcatttctggcaaatgcaagcaacttggtgttgtatctaaagcatcatatgcat 189
||| | || ||| |||| ||||| ||||| ||||| ||||| | ||||| | |||||
Sbjct: 165 aatttggcgtttttggccaatgccagcaatttggtattgtacttgaagcagtacatgcac 224
Query: 190 ctttctccttccaaatcggcaatcaatgtaaccaatttcatgggatcagccttcctcctt 249
| || ||||| ||||| || | ||||| || |||||||||||| | ||||||||||||
Sbjct: 225 atgtcaccttcgaaatctgccaataatgtcactaatttcatgggaaccgccttcctcctt 284
Query: 250 gctctgctagggggtttcttatgtgatgccttcttcaccacttatcatatcttcctcata 309
|| || || || |||||| ||| ||||| || ||||| |||||||| ||| ||| |||
Sbjct: 285 gcacttcttggtggtttcatatccgatgcatttttcacttcttatcatgtctacctgata 344
Query: 310 agtgctcttattgagttcctgggactgattgtactcactgtacaggctcgtgtaccttca 369
||||| ||||||||||||||||| ||||||||||||| |||| |||||| |||||||
Sbjct: 345 agtgcacttattgagttcctgggtttgattgtactcaccatacaagctcgttcaccttca 404
Query: 370 ctaaagccaccaaaatgtgatgatcctggaacccaatgcgaagaagttattggtggaaat 429
|||||||||||| |||||||||| || ||| ||| | ||||||| |||||||||
Sbjct: 405 ctaaagccaccacaatgtgatgaa---ggcaccatatgtcaggaagttaatggtggaaaa 461
Query: 430 gcaataatgctgtttggtggactctatctggtggctcttggggtcggtggaataaaggga 489
||| |||| |||||| ||| |||||||||||||||||||| || || ||||| || |||
Sbjct: 462 gcagcaatgttgtttgctggcctctatctggtggctcttggagttggaggaatcaaagga 521
Query: 490 tcattgccagcacacggtgcagagcaattagatgagaccactacatcaggaagaaagcag 549
|||||||||||||| |||| ||||| || ||||| | ||| || | ||||||||||||
Sbjct: 522 tcattgccagcacatggtggtgagcagtttgatgaaagcaccccaactggaagaaagcag 581
Query: 550 agatcaaccttcttcaactactttgtgttttgcttatcatgtggtgccctcattgccgtt 609
||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||
Sbjct: 582 agatcaaccttcttcaactactttgtgttctgcctatcatgtggtgcccttattgctgtt 641
Query: 610 acctttgtggtatgggttgaagacaacaaaggctgggaatggggtttcgcaatctctact 669
|| ||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||
Sbjct: 642 actcttgtggtgtgggttgaagacaacaaaggatgggaatggggttttgcaatatctaca 701
Query: 670 atctccatatttctatctttcatagttttcttggcaggttctactac 716
|| |||||||| |||| || | | ||||||||||| ||||||||
Sbjct: 702 attaccatatttgtatccatcccattgttcttggcaggctctactac 748
>gnl|LJGI|BG662103 similar to UniRef100_A7Q2R3 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 356
Score = 276 bits (139), Expect = 4e-73
Identities = 256/295 (86%)
Strand = Plus / Plus
Query: 1412 agtacttattccttggttctgctgatcttttcaccatggcagggttgatggaatttttct 1471
|||||||||||||||| |||||||||||||||||| |||| |||||| |||| |||||||
Sbjct: 1 agtacttattccttggctctgctgatcttttcaccttggctgggttgttggagtttttct 60
Query: 1472 tcacagaagcaccaattagcatgagatcttgggccacatcactttcctgggtctctttgg 1531
|| ||||||||||||| || |||||||||| ||||||||||||||| |||| ||||||||
Sbjct: 61 tctcagaagcaccaataaggatgagatctttggccacatcactttcatgggcctctttgg 120
Query: 1532 gtttggggtactacctaagttcagtgatcgtatcaattgtaaatagcatcacaggtagct 1591
| ||||||||||||||||||| || |||||||| ||||| || |||| ||||
Sbjct: 121 caatcgggtactacctaagttcagccattgtatcaatagtaaacagtgtcactggtaaag 180
Query: 1592 cctcccacaaaccatggctatccggagccaaccttaactactatcacctagagagatttt 1651
||||||||||||||||||||| || |||||||||||| |||||||||||||||| || |
Sbjct: 181 gctcccacaaaccatggctatctggtgccaaccttaaccactatcacctagagaggttct 240
Query: 1652 actggcttatgtgtgttcttagtgggttgaatttcctacattacctgttttgggc 1706
| ||||| |||||| | || ||||||||||| |||||||||||||||| ||||||
Sbjct: 241 attggctcatgtgtttgctgagtgggttgaacttcctacattacctgtattgggc 295
>gnl|LJGI|TC79008 similar to UniRef100_A7QI45 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 578
Score = 81.8 bits (41), Expect = 1e-14
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 1390 acattcttttggattgcatttcagtacttattccttggttctgctgatcttttcaccatg 1449
|||||||| ||| | || ||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 6 acattcttgtgggtggcttttcaatacttgtttcttggttctgctgatcttttcactttg 65
Query: 1450 gcagggttgatggaatttttcttcacagaagcaccaattagcatgagatcttgggccaca 1509
|| ||| ||||||| || ||||||||||| |||||| |||||||| || | |||||||
Sbjct: 66 gctgggatgatggagttcttcttcacagaggcaccatggagcatgaggtcattggccaca 125
Query: 1510 tcact 1514
||||
Sbjct: 126 gcact 130