Miyakogusa Predicted Gene

Lj0g3v0275509.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0275509.1 Non Chatacterized Hit- tr|A5APB2|A5APB2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.59,0.0000000000008,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,Rab3 GTPase-activating protein catalytic subunit;
Rab3-GT,CUFF.18283.1
         (1131 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71831 similar to UniRef100_A7NYA5 Cluster: Chromosome...   946   0.0  

>gnl|LJGI|TC71831 similar to UniRef100_A7NYA5 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (17%)
          Length = 736

 Score =  946 bits (477), Expect = 0.0
 Identities = 486/489 (99%)
 Strand = Plus / Plus

                                                                        
Query: 643  gacagtgagaccattgaagacttaagaagactaagtgttgttttcgaaaatgtggagaaa 702
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1    gacagtgagaccattgaagacttaagaagactaagtgttgctttcgaaaatgtggagaaa 60

                                                                        
Query: 703  ttacttactcttgcagcttctcttcatcgcaagcttgtacgagcaccacgcctctccaga 762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttacttactcttgcagcttctcttcatcgcaagcttgtacgagcaccacgcctctccaga 120

                                                                        
Query: 763  gatattttcagtgattactacagcttctacattccaacaatgggaacaggcttgtcagaa 822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gatattttcagtgattactacagcttctacattccaacaatgggaacaggcttgtcagaa 180

                                                                        
Query: 823  gacattgaaaaggagtttgacaagaaacaagtagtaaaggaccgtgagagggaagtcttg 882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gacattgaaaaggagtttgacaagaaacaagtagtaaaggaccgtgagagggaagtcttg 240

                                                                        
Query: 883  tcaaatatgtttgttcctcccacagctaaccagtcttggaggaaggttttgagcatggga 942
            || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241  tccaatatgtttgttcctcccacagctaacccgtcttggaggaaggttttgagcatggga 300

                                                                        
Query: 943  aatcttctcaatggtcatgaacctatcctcagggagattattttttcgctgcgcgacaga 1002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aatcttctcaatggtcatgaacctatcctcagggagattattttttcgctgcgcgacaga 360

                                                                        
Query: 1003 tggaatggtaatcactatgcagctcgtggtggtagtgtttctcaacaagaaattgaaact 1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  tggaatggtaatcactatgcagctcgtggtggtagtgtttctcaacaagaaattgaaact 420

                                                                        
Query: 1063 tacagaatgtacatatgtggaacctctaatgccttacgggtagcactttctgttgtctcg 1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tacagaatgtacatatgtggaacctctaatgccttacgggtagcactttctgttgtctcg 480

                     
Query: 1123 tgtgattaa 1131
            |||||||||
Sbjct: 481  tgtgattaa 489