Miyakogusa Predicted Gene
- Lj0g3v0275259.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0275259.2 Non Chatacterized Hit- tr|B8LQP4|B8LQP4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,54.23,0.000000000000001,TIFACTORIIB,Transcription factor TFIIB;
TRANSCRIPTION FACTOR IIIB,NULL; TRANSCRIPTION INITIATION
FAC,CUFF.18250.2
(1668 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS330398 similar to UniRef100_A7QRG5 Cluster: Chromosom... 1053 0.0
gnl|LJGI|TC73525 UniRef100_Q5WWK6 Cluster: UPF0350 protein lpl14... 226 4e-58
gnl|LJGI|FS344097 143 4e-33
>gnl|LJGI|FS330398 similar to UniRef100_A7QRG5 Cluster: Chromosome chr8 scaffold_150,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_150, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 709
Score = 1053 bits (531), Expect = 0.0
Identities = 548/556 (98%)
Strand = Plus / Plus
Query: 1 atggtgttttgtgatcactgtgcgaaaaacgttcccggagtgcgagtctctgatggtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atggtgttttgtgatcactgtgcgaaaaacgttcccggagtgcgagtctctgatggtccc 213
Query: 61 ctatgttgtaacgaatgtgggaaggtactggaggaattctatttctctgaggaacctacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctatgttgtaacgaatgtgggaaggtactggaggaattctatttctctgaggaacctacc 273
Query: 121 tttgaaaagacttcggacgggcagagcaaattatcaggccgttatgtaagaacaatccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tttgaaaagacttcggacgggcagagcaaattatcaggccgttatgtaagaacaatccaa 333
Query: 181 agcgagtactctgcctcacgtcaaaggactttagacagagcttacgatgagatcaaatat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agtgagtactctgcctcacgtcaaaggactttagacagagcttacgatgagatcaaatat 393
Query: 241 ctgagttacaaccttggagtggatgatgataatgtggccaaccaagctttggccttctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctgagttacaaccttggagtggatgatgataatgtggccaaccaagctttggccttctat 453
Query: 301 agaataggacttgagaaaaatttcaccaaaggacgtaaatcagaacaagtacaggcagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agaataggacttgagaaaaatttcaccaaaggacgtaaatcagaacaagtacaggcagct 513
Query: 361 tgcctctatattgcgttccgggaaaataataagccataccttcttattgatttttcaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgcctctatattgcgttccgggaaaataataagccataccttcttattgatttttcaaat 573
Query: 421 tatttgaggacaaatgtttatgtcctaggtgcagnnnnnnngcagctttgtaaattatta 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 574 tatttgaggacaaatgtttatgtcctaggtgcagtttttttgcagctttgtaaattatta 633
Query: 481 aggcttgaagagcacccaattgttcaaaagcctgtggatcccagtctttttatttataaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aggcttgaagagcacccaattgttcaaaagcctgtggatcccagtctttttatttataaa 693
Query: 541 tatacgattagtttgt 556
||||||||||||||||
Sbjct: 694 tatacgattagtttgt 709
>gnl|LJGI|TC73525 UniRef100_Q5WWK6 Cluster: UPF0350 protein lpl1447; n=1; Legionella
pneumophila str. Lens|Rep: UPF0350 protein lpl1447 -
Legionella pneumophila (strain Lens), partial (13%)
Length = 1133
Score = 226 bits (114), Expect = 4e-58
Identities = 255/306 (83%), Gaps = 27/306 (8%)
Strand = Plus / Plus
Query: 1 atggtgttttgtgatcactgtgcgaaaaacgttcccggagtgcgagtctctgatggtcc- 59
||||||||||||||| |||||| |||||||||| ||||||||||| || ||||||
Sbjct: 93 atggtgttttgtgataactgtgtgaaaaacgttgccggagtgcgaatcaatgatggatta 152
Query: 60 --cctatgttgtaacgaatgtgggaaggtactggaggaattctatttctctgaggaacct 117
|||||||||| ||||||||||||||||| |||| | ||||||||||||||||
Sbjct: 153 atcctatgttgtgacgaatgtgggaaggtattggaaaataactatttctctgaggaa--- 209
Query: 118 acctttgaaaagacttcggacgggcagagcaaattatcaggccgttatgtaagaacaatc 177
|||| ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 210 ---------aagatttctaccgggcagagcgaattatcaggccgttatgtaagaacaatc 260
Query: 178 caaagcgagtactctgcctcacgtcaaaggactttagacagagcttacgatgagatcaaa 237
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 caaagcgagtactctgcctcacgtcaaaggactttagacagagattacgatgagatcaaa 320
Query: 238 tatctgagttacaaccttggagtggatgatgataatgtggccaaccaagctttggccttc 297
||| |||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tatttgagtt------------tggatgatgataatttggccaaccaagctttggccttc 368
Query: 298 tataga 303
||||||
Sbjct: 369 tataga 374
Score = 137 bits (69), Expect = 2e-31
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 1490 aaatgaaacagaaacgagccgaagaggcaaaaaacttgggtcctcctcaatctgcggcag 1549
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 376 aaataaaacagagacgagccgaagaggcaaaaaacttgggtcctcctcaatctgctgcag 435
Query: 1550 aggccgctaagcaaatgttgagaacaaag 1578
||||| ||||||||||||||| |||||||
Sbjct: 436 aggccactaagcaaatgttgataacaaag 464
Score = 54.0 bits (27), Expect = 3e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1633 gtggctccagagaatcccaagaaagtacgat 1663
||||||||| |||||||||||||||||||||
Sbjct: 468 gtggctccaaagaatcccaagaaagtacgat 498
>gnl|LJGI|FS344097
Length = 532
Score = 143 bits (72), Expect = 4e-33
Identities = 87/92 (94%)
Strand = Plus / Plus
Query: 1487 aggaaatgaaacagaaacgagccgaagaggcaaaaaacttgggtcctcctcaatctgcgg 1546
||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 148 aggaaatgaaacagagacgagctgaagaggcaaaaaatttgggtcctcctcaatctgctg 207
Query: 1547 cagaggccgctaagcaaatgttgagaacaaag 1578
|||||||| |||||||||||||||||||||||
Sbjct: 208 cagaggccactaagcaaatgttgagaacaaag 239
Score = 63.9 bits (32), Expect = 3e-09
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 5 tgttttgtgatcactgtgcgaaaaacgttcccggagtgcgagtctctgatggtcccctat 64
|||||||||||| ||||| |||| |||| ||||| ||||| || ||||| || | |||
Sbjct: 10 tgttttgtgatctctgtgtgaaattcgttaccggactgcgaatcaatgatgctctcgtat 69
Query: 65 gttgtaacgaatgtgggaag 84
||||||||||||||||||||
Sbjct: 70 gttgtaacgaatgtgggaag 89