Miyakogusa Predicted Gene

Lj0g3v0275179.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0275179.1 Non Chatacterized Hit- tr|D8S9W1|D8S9W1_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,62.86,3e-19,DDHD,DDHD; SEC23 INTERACTING PROTEIN
P125-RELATED,NULL; SEC-23 INTERACTING PROTEIN P125,NULL;
seg,NU,CUFF.18239.1
         (420 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70347                                                      472   e-133

>gnl|LJGI|TC70347 
          Length = 549

 Score =  472 bits (238), Expect = e-133
 Identities = 241/242 (99%)
 Strand = Plus / Plus

                                                                       
Query: 179 atgatactgctcttttcatattgagacacttgtatagagatataccggaagagcccaatt 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgatactgctcttttcatattgagacacttgtatagagatataccggaagagcccaatt 60

                                                                       
Query: 239 tatcagctgtgcatagcgggggcagcccgaaatatcagagtagttctgctggttggtatg 298
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatcagctgtgcatagcggggccagcccgaaatatcagagtagttctgctggttggtatg 120

                                                                       
Query: 299 atcaaagagacagtgtagaggaagatcttcctctaactttctctgacaaggctatggtca 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaaagagacagtgtagaggaagatcttcctctaactttctctgacaaggctatggtca 180

                                                                       
Query: 359 gaaacttctcaagcaaaactaggaagattctgcataagaaaactgcctctaatttctaaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaacttctcaagcaaaactaggaagattctgcataagaaaactgcctctaatttctaaa 240

             
Query: 419 tg 420
           ||
Sbjct: 241 tg 242