Miyakogusa Predicted Gene
- Lj0g3v0275159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0275159.1 Non Chatacterized Hit- tr|I1KX05|I1KX05_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,47.47,0,XH,Uncharacterised domain XH; coiled-coil,NULL; seg,NULL;
TRANSCRIPTION FACTOR X1-LIKE,NULL; RIBONUC,CUFF.18233.1
(1035 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP040430 weakly similar to UniRef100_Q2QNA8 Cluster: XH... 648 0.0
gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosom... 141 1e-32
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 72 8e-12
gnl|LJGI|FS318213 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 60 3e-08
>gnl|LJGI|BP040430 weakly similar to UniRef100_Q2QNA8 Cluster: XH domain containing
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
XH domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (16%)
Length = 501
Score = 648 bits (327), Expect = 0.0
Identities = 342/347 (98%)
Strand = Plus / Minus
Query: 689 aggaggaagcagagcagcaggctttagaagtgtgttctaagtgggaaaagaatctcaagg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaggaagcagagcagcaggctttagaagtgtgttctaagtgggaaaagaatctcaagg 442
Query: 749 accccaaatggaatcctttcaaaacaatcaccgtccgcggggaaacacaggaaatcattg 808
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 acccccaatggaatcctttcaaaaccatcaccgtccgcggggaaacacaggaaatcattg 382
Query: 809 atgaggatgatgaaaagctggaacgactgagaaaggatgtgggtgttggggcatacaaag 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaggatgatgaaaagctggaacgactgagaaaggatgtgggtgttggggcatacaaag 322
Query: 869 cagtggtagcagctttgaaagagatgaaggaatacaatgctagtgggagagttgcagtct 928
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 cagtggtagcagctttgaaagagatgaaggaataccatgctagtgggagagttgcagtct 262
Query: 929 cagagctatggaatcacacaatgagaaggagagcaactttggaagaaggaattgaatttc 988
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 cagagctatggaatcacaccatgagaaggagagccactttggaagaaggaattgaatttc 202
Query: 989 tgttgggtcaatgcaactttattaaggcagatgagttgaaatgattc 1035
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttgggtcaatgcaactttattaaggcagatgagttgaaatgattc 155
>gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 850
Score = 141 bits (71), Expect = 1e-32
Identities = 221/271 (81%)
Strand = Plus / Minus
Query: 719 tgtgttctaagtgggaaaagaatctcaaggaccccaaatggaatcctttcaaaacaatca 778
|||||||| ||||||||| ||||| ||||||||| | ||| |||| ||||||| ||| |
Sbjct: 711 tgtgttctgtgtgggaaaataatctgaaggacccccattggtatccattcaaaataatta 652
Query: 779 ccgtccgcggggaaacacaggaaatcattgatgaggatgatgaaaagctggaacgactga 838
| | | |||||| || ||||||| || ||||| || |||||||||||| |||||||||
Sbjct: 651 caattggtggggaatcaaaggaaattatagatgaagaagatgaaaagctgaaacgactga 592
Query: 839 gaaaggatgtgggtgttggggcatacaaagcagtggtagcagctttgaaagagatgaagg 898
|| ||| |||||| |||| ||||| |||| ||||| |||||||| ||||||||| |
Sbjct: 591 aaagggacatgggtgctgggccataccaagcggtggtgaaagctttgacagagatgaatg 532
Query: 899 aatacaatgctagtgggagagttgcagtctcagagctatggaatcacacaatgagaagga 958
| |||||| ||||||||||| || |||||||||||||||||||| | || ||||
Sbjct: 531 agtacaatcctagtgggagatctgtggtctcagagctatggaatcatggagagaacagga 472
Query: 959 gagcaactttggaagaaggaattgaatttct 989
||||||||||||||||||| ||||||||||
Sbjct: 471 gagcaactttggaagaaggggttgaatttct 441
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 71.9 bits (36), Expect = 8e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 508 aaccaatcactgatcattaaagagcgtgagagcaatgatgagattcaggaagctcg 563
|||||| |||||||||||||||||||| | |||||||||||| | |||||||||||
Sbjct: 584 aaccaaacactgatcattaaagagcgtaaaagcaatgatgagctacaggaagctcg 639
>gnl|LJGI|FS318213 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 778
Score = 60.0 bits (30), Expect = 3e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 524 ttaaagagcgtgagagcaatgatgagattcaggaagctcgtaaaaaattgattgaggg 581
||||||||||||||||||| |||||| ||||| || |||| |||| | ||||||||||
Sbjct: 632 ttaaagagcgtgagagcaacgatgagcttcagaaaactcgaaaaagaatgattgaggg 689
Score = 58.0 bits (29), Expect = 1e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 345 tgaagatctcaaggatcaaaatgaaaaactcaatgccaaaataattgagcttgaaaaaca 404
||||||||| |||| |||| ||| ||||||||||||||||| |||| |||||||||||
Sbjct: 399 tgaagatcttaagggccaaactgaccaactcaatgccaaaatagttgaacttgaaaaaca 458
Query: 405 a 405
|
Sbjct: 459 a 459