Miyakogusa Predicted Gene
- Lj0g3v0275139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0275139.1 Non Chatacterized Hit- tr|I1MZC4|I1MZC4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,58.54,2e-17,seg,NULL; XH,Uncharacterised domain XH; TRANSCRIPTION
FACTOR X1-LIKE,NULL; RIBONUCLEASE P PROTEIN SU,gene.g21395.t1.1
(924 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosom... 119 3e-26
gnl|LJGI|BP040430 weakly similar to UniRef100_Q2QNA8 Cluster: XH... 105 5e-22
gnl|LJGI|FS318213 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 74 2e-12
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 66 4e-10
>gnl|LJGI|GO026970 similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 850
Score = 119 bits (60), Expect = 3e-26
Identities = 105/120 (87%)
Strand = Plus / Minus
Query: 691 gcggtggtacaagcttggaaagagatgaatgaccacaatcctagtgggagatttgtagtc 750
|||||||| |||||| || |||||||||||| |||||||||||||||||| ||| |||
Sbjct: 562 gcggtggtgaaagctttgacagagatgaatgagtacaatcctagtgggagatctgtggtc 503
Query: 751 tcagaactatggaatcacggaatgaaaaggaaagcaactttggaagaaggagttgaattt 810
||||| ||||||||||| ||| ||| |||| |||||||||||||||||| |||||||||
Sbjct: 502 tcagagctatggaatcatggagagaacaggagagcaactttggaagaaggggttgaattt 443
>gnl|LJGI|BP040430 weakly similar to UniRef100_Q2QNA8 Cluster: XH domain containing
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: XH domain containing protein, expressed -
Oryza sativa subsp. japonica (Rice), partial (16%)
Length = 501
Score = 105 bits (53), Expect = 5e-22
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 637 gatgatgaaaagctgaaacaactgagaaaggaagtgagctttgaggcacaatgggcggtg 696
||||||||||||||| ||| |||||||||||| ||| | ||| |||| | || |||
Sbjct: 376 gatgatgaaaagctggaacgactgagaaaggatgtgggtgttggggcatacaaagcagtg 317
Query: 697 gtacaagcttggaaagagatgaatgaccacaatcctagtgggagatttgtagtctcagaa 756
||| ||||| |||||||||||| || || || ||||||||||| ||| |||||||||
Sbjct: 316 gtagcagctttgaaagagatgaaggaataccatgctagtgggagagttgcagtctcagag 257
Query: 757 ctatggaatcacggaatgaaaaggaaagcaactttggaagaaggagttgaatttttgttg 816
|||||||||||| |||| ||||| ||| ||||||||||||||| |||||||| |||||
Sbjct: 256 ctatggaatcacaccatgagaaggagagccactttggaagaaggaattgaatttctgttg 197
Query: 817 agtca 821
||||
Sbjct: 196 ggtca 192
>gnl|LJGI|FS318213 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 778
Score = 73.8 bits (37), Expect = 2e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 566 ttaaagagcgtgagagcaatgatgagcttcagaaagcccggaaaagaatgatagagg 622
||||||||||||||||||| ||||||||||||||| | || ||||||||||| ||||
Sbjct: 632 ttaaagagcgtgagagcaacgatgagcttcagaaaactcgaaaaagaatgattgagg 688
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 65.9 bits (33), Expect = 4e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 550 aaccaatcactgatcattaaagagcgtgagagcaatgatgagcttcagaaagc 602
|||||| |||||||||||||||||||| | |||||||||||||| ||| ||||
Sbjct: 584 aaccaaacactgatcattaaagagcgtaaaagcaatgatgagctacaggaagc 636