Miyakogusa Predicted Gene

Lj0g3v0274969.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0274969.1 Non Chatacterized Hit- tr|I1MAT2|I1MAT2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,82.22,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Sugar_tr,General substrate
transporter; SUGRTRNSPOR,CUFF.18222.1
         (687 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72367 similar to UniRef100_A7NUZ2 Cluster: Chromosome...   155   4e-37
gnl|LJGI|DC594650 similar to UniRef100_A7NUZ2 Cluster: Chromosom...    56   3e-07

>gnl|LJGI|TC72367 similar to UniRef100_A7NUZ2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 490

 Score =  155 bits (78), Expect = 4e-37
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaccatctttgagaagcggtatcgacctcagttggtgatggcgtttgctatccctttg 60
           ||||| || |||||||||| |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 373 atgacgatttttgagaagcagtatcggcctcagttggtgatggcgtttgctattcctttg 432

                                                                     
Query: 61  ttacaacagcttaatgggatcaacattgtggcattttatgcgcctaatctgtttcaat 118
           |  || ||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 433 tctcagcagcttactgggatcaacattgtggcgttttatgcgcctaatctgtttcaat 490


>gnl|LJGI|DC594650 similar to UniRef100_A7NUZ2 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 480

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 416 ttccaagtgagattttccccttaaaaatcagatccactgggcaaagcatagc 467
           ||||||||||||||||||| || || |||||| ||||||| || ||||||||
Sbjct: 480 ttccaagtgagattttcccattgaagatcagaaccactggacagagcatagc 429