Miyakogusa Predicted Gene
- Lj0g3v0274219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0274219.1 Non Chatacterized Hit- tr|I1L3K9|I1L3K9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21254
PE,82.6,0,seg,NULL; Ribonuclease H-like,Ribonuclease H-like
domain,CUFF.18208.1
(2436 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68998 similar to UniRef100_A7QGS9 Cluster: Chromosome... 1554 0.0
gnl|LJGI|TC60823 similar to UniRef100_A7QGS9 Cluster: Chromosome... 1033 0.0
gnl|LJGI|TC66487 similar to UniRef100_A7QGS9 Cluster: Chromosome... 789 0.0
gnl|LJGI|TC70088 similar to UniRef100_A7QGS9 Cluster: Chromosome... 700 0.0
gnl|LJGI|BI418008 similar to UniRef100_A7QYT0 Cluster: Chromosom... 96 1e-18
gnl|LJGI|TC63825 similar to UniRef100_A7QYT0 Cluster: Chromosome... 96 1e-18
gnl|LJGI|TC78414 similar to UniRef100_A7QYT0 Cluster: Chromosome... 82 2e-14
>gnl|LJGI|TC68998 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 784
Score = 1554 bits (784), Expect = 0.0
Identities = 784/784 (100%)
Strand = Plus / Plus
Query: 1297 ttcattagtttaatcaaggattttaacaaagagctaccacttttcagggttgtgactgag 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcattagtttaatcaaggattttaacaaagagctaccacttttcagggttgtgactgag 60
Query: 1357 aattgcctaaaggttgcaaattttatagacactgaatctcaggtgaggaatatttttctc 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattgcctaaaggttgcaaattttatagacactgaatctcaggtgaggaatatttttctc 120
Query: 1417 aagtaccggatgcaggagatggactatcccgggttgcttcgagtccctccaccgaaatgt 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtaccggatgcaggagatggactatcccgggttgcttcgagtccctccaccgaaatgt 180
Query: 1477 gaccctatgacaaactttgcatctgtgtttccaatgctggaggacattttgtcctgtgct 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaccctatgacaaactttgcatctgtgtttccaatgctggaggacattttgtcctgtgct 240
Query: 1537 agaatcatccaaatggtaatgttggaggactcgtttaaggtaatgtgcatggaggatcca 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaatcatccaaatggtaatgttggaggactcgtttaaggtaatgtgcatggaggatcca 300
Query: 1597 ctggccagagaagttgctgggatggttcagaatgaggagttttggaatgaactagaagca 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggccagagaagttgctgggatggttcagaatgaggagttttggaatgaactagaagca 360
Query: 1657 gtttattcacttgtgaagattatcaagggaatggttcaggacatggaagctgagaggcca 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttattcacttgtgaagattatcaagggaatggttcaggacatggaagctgagaggcca 420
Query: 1717 ttgattggtcggtgcttgcctctttgggaggagctgagaaccaaagtgaaggagtggtgt 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgattggtcggtgcttgcctctttgggaggagctgagaaccaaagtgaaggagtggtgt 480
Query: 1777 ggcaagtacaatgttatggaaggacctgttgataaaatagttgaaaaaaggttcagaaaa 1836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcaagtacaatgttatggaaggacctgttgataaaatagttgaaaaaaggttcagaaaa 540
Query: 1837 aactatcaccctgcttggtcagcagcatttattcttgatccactttacttgattaaagac 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactatcaccctgcttggtcagcagcatttattcttgatccactttacttgattaaagac 600
Query: 1897 acaagtggaaagtaccttcctccattcaagtgtttgacacgcgagcaggagaaagatgtg 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaagtggaaagtaccttcctccattcaagtgtttgacacgcgagcaggagaaagatgtg 660
Query: 1957 gataagttattgactcggctagcctcaagagaagaagctcatgttgtgttgatggagcta 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gataagttattgactcggctagcctcaagagaagaagctcatgttgtgttgatggagcta 720
Query: 2017 atgaaatggagatcagaagggcttgatccactttatgcacaggctgttcagatgaaacaa 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgaaatggagatcagaagggcttgatccactttatgcacaggctgttcagatgaaacaa 780
Query: 2077 aggg 2080
||||
Sbjct: 781 aggg 784
>gnl|LJGI|TC60823 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 725
Score = 1033 bits (521), Expect = 0.0
Identities = 524/525 (99%)
Strand = Plus / Plus
Query: 1 atgccccaaaacgaatcccactgtcaccacaatggtgaaaccaccctcaccacaagctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgccccaaaacgaatcccactgtcaccacaatggtgaaaccaccctcaccacaagctca 260
Query: 61 gctccatcttcacagcactgcaaccccgttctgacccttcacctcagggaaccccaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctccatcttcacagcactgcaaccccgttctgacccttcacctcagggaaccccaagac 320
Query: 121 tccattttggtccccaattcagacacccttttggccaaaacaatggcttccaccacctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccattttggtccccaattcagacacccttttggccaaaacaatggcttccaccacctcc 380
Query: 181 acttccaccgaccctctcccttcttcatcctccgacgacgttgctgtcaaagccgttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttccaccgaccctctcccttcttcatcctccgacgacgttgctgtcaaagccgttaac 440
Query: 241 aaacgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatgg 500
Query: 301 tactgggcgcacttggaaccccttctggttcgaaatcccgacacgggcatgcccaaatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactgggcgcacttggaaccccttctggttcgaaatcccgacacgggcatgcccaaatcg 560
Query: 361 gtgaagctcaagtgctccctctgtgactctgttttctctgcttcaaacccttccagaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgaagctcaagtgctccctctgtgactctgttttctctgcttcaaacccttccagaacc 620
Query: 421 gcttctgagcacttgaagcgtggaacttgcgccaatttcagctccggtttgaagcccggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcttctgagcacttgaagcgtggaacttgcgccaatttcagctccggtttgaagcccggt 680
Query: 481 tcggtcccttcgccgcttcccatctcgtcggtgtccggttcgaac 525
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 tcggtcccttcgccgcttcccatctcgtcggtggccggttcgaac 725
>gnl|LJGI|TC66487 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 699
Score = 789 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Plus
Query: 1 atgccccaaaacgaatcccactgtcaccacaatggtgaaaccaccctcaccacaagctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atgccccaaaacgaatcccactgtcaccacaatggtgaaaccaccctcaccacaagctca 357
Query: 61 gctccatcttcacagcactgcaaccccgttctgacccttcacctcagggaaccccaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gctccatcttcacagcactgcaaccccgttctgacccttcacctcagggaaccccaagac 417
Query: 121 tccattttggtccccaattcagacacccttttggccaaaacaatggcttccaccacctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tccattttggtccccaattcagacacccttttggccaaaacaatggcttccaccacctcc 477
Query: 181 acttccaccgaccctctcccttcttcatcctccgacgacgttgctgtcaaagccgttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 acttccaccgaccctctcccttcttcatcctccgacgacgttgctgtcaaagccgttaac 537
Query: 241 aaacgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aaacgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatgg 597
Query: 301 tactgggcgcacttggaaccccttctggttcgaaatcccgacacgggcatgcccaaatcg 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 598 tactgggcgcacttggaaccccttctggttcgaaatccagacacgggcatgcccaaatcg 657
Query: 361 gtgaagctcaagtgctccctctgtgactctgttttctctgct 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtgaagctcaagtgctccctctgtgactctgttttctctgct 699
>gnl|LJGI|TC70088 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 624
Score = 700 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Plus
Query: 2080 gatccgatgaccggaaagatgaaagttgcgaatccactgagcagtaggcttgtctgggaa 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatccgatgaccggaaagatgaaagttgcgaatccactgagcagtaggcttgtctgggaa 60
Query: 2140 acatgcttgtgtgagttcaaatcactggggaagattgcagtgaggctcattttcctgcat 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatgcttgtgtgagttcaaatcactggggaagattgcagtgaggctcattttcctgcat 120
Query: 2200 gcaacctcatctgggtttaagagtaattggtctttcatgaggaaaatttctgcaaataaa 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacctcatctgggtttaagagtaattggtctttcatgaggaaaatttctgcaaataaa 180
Query: 2260 caacactcgagcgcttcattggaaagagctcagaaaatggtatacattgcagctcatgct 2319
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccacactcgagcgcttcattggaaagagctcagaaaatggtatacattgcagctcatgct 240
Query: 2320 aagcttgaaaggagagatttttccagtgaggaagagaaggatgcagaactgtttgccatg 2379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagcttgaaaggagagatttttccagtgaggaagagaaggatgcagaactgtttgccatg 300
Query: 2380 agtggtagtgaggatggcatgctggctgaggtctatgctgatgcaaccttagtgtaa 2436
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtggtagtgaggatggcatgctggctgaggtctatgctgatgcaaccttagtgtaa 357
>gnl|LJGI|BI418008 similar to UniRef100_A7QYT0 Cluster: Chromosome undetermined
scaffold_254, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_254, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(17%)
Length = 409
Score = 95.6 bits (48), Expect = 1e-18
Identities = 204/256 (79%)
Strand = Plus / Plus
Query: 1817 ttgaaaaaaggttcagaaaaaactatcaccctgcttggtcagcagcatttattcttgatc 1876
||||||||||||||| || ||||| |||||||||||| | ||||||| ||||| || |
Sbjct: 138 ttgaaaaaaggttcaagaagaactaccaccctgcttgggctgcagcatacattctagacc 197
Query: 1877 cactttacttgattaaagacacaagtggaaagtaccttcctccattcaagtgtttgacac 1936
| ||||| | || | ||||||||| || | ||||||||| |||||||||| ||||| |
Sbjct: 198 ctctttatctaataagagacacaagcggtatgtaccttccgccattcaagtacttgactc 257
Query: 1937 gcgagcaggagaaagatgtggataagttattgactcggctagcctcaagagaagaagctc 1996
|| |||||||||||||| || | | | || || |||| | || ||||| ||||| |
Sbjct: 258 cggaacaggagaaagatgtcgacaggctcttaacaaggcttgtttcgagagacgaagcac 317
Query: 1997 atgttgtgttgatggagctaatgaaatggagatcagaagggcttgatccactttatgcac 2056
| ||| ||||||| || ||||| |||||| ||||||||||||||||| ||||||| |
Sbjct: 318 acattgctctgatggaactcatgaagtggagaacagaagggcttgatccagtttatgctc 377
Query: 2057 aggctgttcagatgaa 2072
| ||||||||||||||
Sbjct: 378 aagctgttcagatgaa 393
>gnl|LJGI|TC63825 similar to UniRef100_A7QYT0 Cluster: Chromosome undetermined
scaffold_254, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_254,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 782
Score = 95.6 bits (48), Expect = 1e-18
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 244 cgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatggtac 303
|||||||| ||| | ||||| ||||| ||||| || | |||||||||||||| ||||||
Sbjct: 450 cgctacgatggtttggtcacggttcgaaccaaagctgtgaagggtaaaggggcttggtac 509
Query: 304 tgggcgcacttggaaccccttctggttcgaaatcccgacacgggcatgcccaaatcggtg 363
||||||||| | |||||| | ||||||| || |||| || || | |||||| |||||
Sbjct: 510 tgggcgcaccttgaacccatgctggttcacaacgccgatacagggctacccaaagcggtg 569
Query: 364 aagctcaagtgctccctctgtgactctgttttctctgcttcaaacccttccagaaccgct 423
|||||||||||||| ||||| ||| | || ||||| ||||| ||||| || | |||||
Sbjct: 570 aagctcaagtgctctctctgcgacgccgtattctccgcttccaacccctctcgcaccgcc 629
Query: 424 tctgagcacttgaagcgtggaacttgcgccaatttc 459
|||||||| | ||||| ||||| ||| ||||||||
Sbjct: 630 tctgagcatcttaagcgcggaacctgccccaatttc 665
>gnl|LJGI|TC78414 similar to UniRef100_A7QYT0 Cluster: Chromosome undetermined
scaffold_254, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_254, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(39%)
Length = 1764
Score = 81.8 bits (41), Expect = 2e-14
Identities = 182/229 (79%)
Strand = Plus / Plus
Query: 1817 ttgaaaaaaggttcagaaaaaactatcaccctgcttggtcagcagcatttattcttgatc 1876
|||| ||| ||||||| |||||||| |||||||| ||| | || |||| |||||||| |
Sbjct: 432 ttgagaaacggttcaggaaaaactaccaccctgcatgggctgctgcatacattcttgacc 491
Query: 1877 cactttacttgattaaagacacaagtggaaagtaccttcctccattcaagtgtttgacac 1936
||||||| || | | ||||| || || ||||||||||| |||| ||||| |||| | |
Sbjct: 492 cactttatctggtgagggacaccagcggcaagtaccttccgccatacaagtttttggcgc 551
Query: 1937 gcgagcaggagaaagatgtggataagttattgactcggctagcctcaagagaagaagctc 1996
||||||||||| || ||||| ||| | | || |||| | |||| |||| || || |
Sbjct: 552 cggagcaggagaaggacgtggacaagctcataacgaggcttgtctcacgagatgaggcgc 611
Query: 1997 atgttgtgttgatggagctaatgaaatggagatcagaagggcttgatcc 2045
| |||||||| |||||||| |||||||||||| || |||||||||||||
Sbjct: 612 acgttgtgttaatggagctcatgaaatggagaacacaagggcttgatcc 660
Score = 69.9 bits (35), Expect = 7e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 2326 gaaaggagagatttttccagtgaggaagagaaggatgcagaactgtttgcc 2376
|||||||| |||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 924 gaaaggagggatttttccagtgatgaagataaggatgcagagctgtttgcc 974