Miyakogusa Predicted Gene
- Lj0g3v0274039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0274039.1 Non Chatacterized Hit- tr|A5BYQ2|A5BYQ2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,65.79,8e-18,ARM
repeat,Armadillo-type fold; ARM_REPEAT,Armadillo; Arm,Armadillo;
Proteasom_PSMB,26S proteasome n,CUFF.18149.1
(1629 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61713 similar to UniRef100_A7P3R0 Cluster: Chromosome... 1459 0.0
gnl|LJGI|FS343458 similar to UniRef100_A7P3R0 Cluster: Chromosom... 1055 0.0
>gnl|LJGI|TC61713 similar to UniRef100_A7P3R0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 789
Score = 1459 bits (736), Expect = 0.0
Identities = 736/736 (100%)
Strand = Plus / Plus
Query: 1 atgttagcctccacactcctatcagcaacaccctctaccctcaacaattcgcatttcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atgttagcctccacactcctatcagcaacaccctctaccctcaacaattcgcatttcgtc 113
Query: 61 cttcgaatcactaccacagtcgctgaatttcaccctcgtagcagagtttcaatctcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 cttcgaatcactaccacagtcgctgaatttcaccctcgtagcagagtttcaatctcttcc 173
Query: 121 aaatcaaactccaaattccccctcgttgccacgctctgtattaatggtcgcggcgacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aaatcaaactccaaattccccctcgttgccacgctctgtattaatggtcgcggcgacggt 233
Query: 181 ggcgccgttgatgctaactcacttccaggcattgatgcagtagaaagtgaatcttctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ggcgccgttgatgctaactcacttccaggcattgatgcagtagaaagtgaatcttctggg 293
Query: 241 cgtagtgatggttatgtggccttgtttgttcgcatgttaggcctagatcatgattttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cgtagtgatggttatgtggccttgtttgttcgcatgttaggcctagatcatgattttctt 353
Query: 301 gacagagaacaagctatagttgctctctggaaatattcacttggtggaaagaaatgtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gacagagaacaagctatagttgctctctggaaatattcacttggtggaaagaaatgtgtt 413
Query: 361 gacagtataatgcagtttcctggctgtattaatcttgttgtgaacctccttagatcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gacagtataatgcagtttcctggctgtattaatcttgttgtgaacctccttagatcagag 473
Query: 421 tctagttcagcatgtgaggcagctgcaggccttctgcgatcactatcttccgtcaatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctagttcagcatgtgaggcagctgcaggccttctgcgatcactatcttccgtcaatcta 533
Query: 481 tataggaattctgtagcggatagtggagcaatagaagagataagcagattgctcaggcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tataggaattctgtagcggatagtggagcaatagaagagataagcagattgctcaggcaa 593
Query: 541 tcttccttggctcccgaggtaaaggagcagagtttgagtacgctgtggaatttatctgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tcttccttggctcccgaggtaaaggagcagagtttgagtacgctgtggaatttatctgtt 653
Query: 601 gacgagaagctctgcattaaaattgcagagagtgatattctgctcttagctattaagtac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gacgagaagctctgcattaaaattgcagagagtgatattctgctcttagctattaagtac 713
Query: 661 cttgatgacgaagacataaaagtgaaggaagctgcagggggaattttggcaaatttagca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cttgatgacgaagacataaaagtgaaggaagctgcagggggaattttggcaaatttagca 773
Query: 721 ctgagccgtgccaacc 736
||||||||||||||||
Sbjct: 774 ctgagccgtgccaacc 789
>gnl|LJGI|FS343458 similar to UniRef100_A7P3R0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 644
Score = 1055 bits (532), Expect = 0.0
Identities = 532/532 (100%)
Strand = Plus / Plus
Query: 1 atgttagcctccacactcctatcagcaacaccctctaccctcaacaattcgcatttcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgttagcctccacactcctatcagcaacaccctctaccctcaacaattcgcatttcgtc 172
Query: 61 cttcgaatcactaccacagtcgctgaatttcaccctcgtagcagagtttcaatctcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 cttcgaatcactaccacagtcgctgaatttcaccctcgtagcagagtttcaatctcttcc 232
Query: 121 aaatcaaactccaaattccccctcgttgccacgctctgtattaatggtcgcggcgacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaatcaaactccaaattccccctcgttgccacgctctgtattaatggtcgcggcgacggt 292
Query: 181 ggcgccgttgatgctaactcacttccaggcattgatgcagtagaaagtgaatcttctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggcgccgttgatgctaactcacttccaggcattgatgcagtagaaagtgaatcttctggg 352
Query: 241 cgtagtgatggttatgtggccttgtttgttcgcatgttaggcctagatcatgattttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cgtagtgatggttatgtggccttgtttgttcgcatgttaggcctagatcatgattttctt 412
Query: 301 gacagagaacaagctatagttgctctctggaaatattcacttggtggaaagaaatgtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gacagagaacaagctatagttgctctctggaaatattcacttggtggaaagaaatgtgtt 472
Query: 361 gacagtataatgcagtttcctggctgtattaatcttgttgtgaacctccttagatcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gacagtataatgcagtttcctggctgtattaatcttgttgtgaacctccttagatcagag 532
Query: 421 tctagttcagcatgtgaggcagctgcaggccttctgcgatcactatcttccgtcaatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tctagttcagcatgtgaggcagctgcaggccttctgcgatcactatcttccgtcaatcta 592
Query: 481 tataggaattctgtagcggatagtggagcaatagaagagataagcagattgc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tataggaattctgtagcggatagtggagcaatagaagagataagcagattgc 644
Score = 60.0 bits (30), Expect = 5e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 71 ctaccacagtcgctgaatttcaccctcgtagcagagtt 108
||||||||||||| |||||||||||||||||| |||||
Sbjct: 35 ctaccacagtcgcggaatttcaccctcgtagccgagtt 72