Miyakogusa Predicted Gene

Lj0g3v0273499.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0273499.1 Non Chatacterized Hit- tr|A5AMC2|A5AMC2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.09,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; SUBFAMILY NOT NAMED,NULL; ATP-DEP,CUFF.18116.1
         (982 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP043658 homologue to UniRef100_A7QBN2 Cluster: Chromos...   751   0.0  

>gnl|LJGI|BP043658 homologue to UniRef100_A7QBN2 Cluster: Chromosome chr1 scaffold_75,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_75, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 424

 Score =  751 bits (379), Expect = 0.0
 Identities = 386/387 (99%), Gaps = 1/387 (0%)
 Strand = Plus / Plus

                                                                       
Query: 546 caagagggaagaagccgtgagtgagtttgctaagtcaaaatccatgtcagagcaaaggca 605
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1   caagagggaagaagccgtgagtgagtt-gctaagtcaaaatccatgtcagagcaaaggca 59

                                                                       
Query: 606 atacctgccaattttttcagtgcgagaagagttattgcaggtcattcgcgaaaatcaggt 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  atacctgccaattttttcagtgcgagaagagttattgcaggtcattcgcgaaaatcaggt 119

                                                                       
Query: 666 cgtggtagtggttggagaaactggttcaggaaaatcaacccaattggcacagtatcttca 725
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cgtggtagtggttggagaaactggttcaggaaaatcaacccaattggcacagtatcttca 179

                                                                       
Query: 726 tgaggatggctatactgtaggtggtggtattgtaggttgcacgcagccgaggcgtgtggc 785
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgaggatggctatactgtaggtggtggtattgtaggttgcacgcagccgaggcgtgtggc 239

                                                                       
Query: 786 agctatgagtgttgctaagagagttagtgaggagatggaaaccgagttgggtgatcaagt 845
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agctatgagtgttgctaagagagttagtgaggagatggaaaccgagttgggtgatcaagt 299

                                                                       
Query: 846 tggttatgctatccgttttgaagatgtcactggcccaaataccattataaagtacatgac 905
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tggttatgctatccgttttgaagatgtcactggcccaaataccattataaagtacatgac 359

                                      
Query: 906 tgatggggtacttctgcgcgaaacact 932
           |||||||||||||||||||||||||||
Sbjct: 360 tgatggggtacttctgcgcgaaacact 386