Miyakogusa Predicted Gene
- Lj0g3v0273479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0273479.1 Non Chatacterized Hit- tr|I1KWF8|I1KWF8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.11,0,RNase_PH,Exoribonuclease, phosphorolytic domain 1;
RNase_PH_C,Exoribonuclease, phosphorolytic domain,CUFF.18117.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75646 similar to UniRef100_Q2PYZ2 Cluster: 3'-5'-exor... 1273 0.0
gnl|LJGI|DC596983 similar to UniRef100_A7PWG2 Cluster: Chromosom... 343 1e-93
gnl|LJGI|AV773653 similar to UniRef100_Q2G6N8 Cluster: TPR repea... 123 2e-27
>gnl|LJGI|TC75646 similar to UniRef100_Q2PYZ2 Cluster: 3'-5'-exoribonuclease/RNA
binding protein-like protein; n=1; Solanum
tuberosum|Rep: 3'-5'-exoribonuclease/RNA binding
protein-like protein - Solanum tuberosum (Potato),
partial (63%)
Length = 846
Score = 1273 bits (642), Expect = 0.0
Identities = 694/710 (97%), Gaps = 1/710 (0%)
Strand = Plus / Plus
Query: 204 atcaactactatgttgactgcaataaaaatggaagttatggctccctccttggagtcacc 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaactactatgttgactgcaataaaaatggaagttatggctccctccttggagtcacc 60
Query: 264 agatgtgggttgtatagctattgatttccacatgcctccaatttgttctccaattgttag 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgtgggttgtatagctattgatttccacatgcctccaatttgttctccaattgttag 120
Query: 324 gcccggaaggcctgctgaagcatcaccagttgtgacaaagcagttgtctgacaccatttc 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcccggaaggcctgctgaagcatcaccagttgtgacaaagcagttgtctgacaccatttc 180
Query: 384 aagttctggaatgattgatttgaaagaattgtccttggtcagtgggaaagctgcatggat 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttctggaatgattgatttgaaagaattgtccttggtcagtgggaaagctgcatggat 240
Query: 444 ggcttacttggatgtctattgtttggatgctgatggtgctctttttgatgctgctttact 503
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 ggcttacttggatgtctattgtttggatgctgatggtgctctttttggtgctgctttact 300
Query: 504 ttctgtagttgctgctttatctcatttgcaaattccttc-tgttgccatgaacgatgacg 562
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 301 ttctgtagttgctgctttatctcatttgcaaattccttcatgttgctatgaacgatgacg 360
Query: 563 gcaaaatagtactcgtatccgatgaagatggacaaaagcaggcacaggagttggttaata 622
|||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||||
Sbjct: 361 gcaaaatagtactcgtgtctgatgaagatggacaaaagcaggcacaagagctggttaata 420
Query: 623 aggaaaagaggaagcttacattaagaaacattccattctcattaacatgcatactttaca 682
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggaaaagaggaagcttacactaagaaacattccattctcattaacatgcatactttaca 480
Query: 683 aaaattacatcttggcagatcctactgcagaagaagaatccattatggaaacccatatga 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaattacatcttggcagatcctactgcagaagaagaatccattatggaaacccatatga 540
Query: 743 ctgtagttttgaatacatctggtcaacttatatctctttacaagcctggcgggccagttc 802
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctatagttttgaatacatctggtcaacttatatctctttacaagcctggcgggccagttc 600
Query: 803 ttgcctatacttctgctctccaggactgtgttgcattgaccaggcaaagagttaaagaac 862
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 601 ttgtctatacttctgctctccaggactgtgttccattgaccaggcaaagagttaaagaac 660
Query: 863 ttaagagcctcttagacagagaaaattcggctgctatggaagttgagtag 912
||||| || ||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 661 ttaagggcttcttagacaaagaaaattctgctgctatggaggttgagtag 710
>gnl|LJGI|DC596983 similar to UniRef100_A7PWG2 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 323
Score = 343 bits (173), Expect = 1e-93
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 atggggttgcccaatacatctgaggacttatcatctgaaatggaggttgatgcctttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atggggttgcccaatacatctgaggacttatcatctgaaatggaggttgatgcctttaga 210
Query: 61 cgccttttcccacttagattttttgagcgtcatctttctgaatctatacgccctgatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 cgccttttcccacttagattttttgagcgtcatctttctgaatctatacgccctgatggt 270
Query: 121 agaccacttgcgaaagcgagagatacaagcatatttcttggtgctgttgcatc 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agaccacttgcgaaagcgagagatacaagcatatttcttggtgctgttgcatc 323
>gnl|LJGI|AV773653 similar to UniRef100_Q2G6N8 Cluster: TPR repeat protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep: TPR
repeat protein - Novosphingobium aromaticivorans (strain
DSM 12444), partial (5%)
Length = 214
Score = 123 bits (62), Expect = 2e-27
Identities = 100/110 (90%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 805 gcctatacttctgctctcca-ggactgtgttgcattgaccaggcaaagagttaaagaact 863
|||||||||||||||||||| |||||||||||| |||||| ||| |||||||||| |||
Sbjct: 214 gcctatacttctgctctccacggactgtgttgccttgacccggcccagagttaaagtact 155
Query: 864 taagagcctcttagacagagaa-aattcggctgctatggaagttgagtag 912
|||||||||||||| | ||||| |||||||||||||||||| ||||||||
Sbjct: 154 taagagcctcttagtccgagaacaattcggctgctatggaaattgagtag 105