Miyakogusa Predicted Gene
- Lj0g3v0273439.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0273439.1 tr|G7IL78|G7IL78_MEDTR Auxin-induced protein 5NG4
OS=Medicago truncatula GN=MTR_2g007970 PE=4 SV=1,63.43,0,FAMILY NOT
NAMED,NULL; seg,NULL; EamA,Drug/metabolite transporter; Multidrug
resistance efflux trans,CUFF.18109.1
(1191 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60577 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 1336 0.0
gnl|LJGI|TC61995 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 462 e-129
gnl|LJGI|TC60153 weakly similar to UniRef100_A2Q3V4 Cluster: Int... 60 3e-08
>gnl|LJGI|TC60577 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 795
Score = 1336 bits (674), Expect = 0.0
Identities = 674/674 (100%)
Strand = Plus / Plus
Query: 1 atgggaaaaataataaggaaagtgcaggggttgaaacctgctctagcgatgttgacggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atgggaaaaataataaggaaagtgcaggggttgaaacctgctctagcgatgttgacggtg 146
Query: 61 cagattattttctctacgacaaacgtggtctacaaacttgccataaacgatggagtgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cagattattttctctacgacaaacgtggtctacaaacttgccataaacgatggagtgagt 206
Query: 121 gtcaaaattctcactgcctaccgtctcatgttcgctggagctttcaccgttccactagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gtcaaaattctcactgcctaccgtctcatgttcgctggagctttcaccgttccactagct 266
Query: 181 cttattcttgaaaggaagaacagagcaaagcttacttggagagtgcttttcatgtcattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cttattcttgaaaggaagaacagagcaaagcttacttggagagtgcttttcatgtcattt 326
Query: 241 atctgtggtttattaggggggagtttgttccaaaacctttatttggcatccttggccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atctgtggtttattaggggggagtttgttccaaaacctttatttggcatccttggccttg 386
Query: 301 atatcagcaacatttgcttctgcttctataaatctcgttcccgcagtcacttttattttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atatcagcaacatttgcttctgcttctataaatctcgttcccgcagtcacttttattttg 446
Query: 361 gccatcacattcggtttagaaaaattgaaacttcacaaggcagcaggcaaggctaaggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gccatcacattcggtttagaaaaattgaaacttcacaaggcagcaggcaaggctaaggtg 506
Query: 421 cttggaacaatatcaggaattggaggggcaatgatgttgacctttctcaaaggtgtggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttggaacaatatcaggaattggaggggcaatgatgttgacctttctcaaaggtgtggaa 566
Query: 481 cttagcatttggcctttccatatcaacatccttcataaaaaacacactggaacacactct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cttagcatttggcctttccatatcaacatccttcataaaaaacacactggaacacactct 626
Query: 541 aatagtaaactacctggtatcttttgtggtcttgcaagctgcttttgttactctatatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aatagtaaactacctggtatcttttgtggtcttgcaagctgcttttgttactctatatgg 686
Query: 601 ctcatcattcaggctaagatgagcaaagaatatccgagtcattacactagtacagctttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctcatcattcaggctaagatgagcaaagaatatccgagtcattacactagtacagctttg 746
Query: 661 atgaccttaatggc 674
||||||||||||||
Sbjct: 747 atgaccttaatggc 760
>gnl|LJGI|TC61995 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 769
Score = 462 bits (233), Expect = e-129
Identities = 532/629 (84%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 1 atgggaaaaataataaggaaagtgcaggggttgaaacctgctctagcgatgttgacggtg 60
|||||| | ||||| |||||| |||| |||||||| || || || |||||||| ||||
Sbjct: 104 atgggagatataatgaggaaaatgcaagggttgaagccagccctgatgatgttgatggtg 163
Query: 61 cagattattttctctacgacaaacgtggtctacaaacttgccataaacgatggagtgagt 120
|||||| ||| ||||| | || ||| | |||||| ||||||||||||||||||| ||
Sbjct: 164 cagattgctttttctacaatgaatgtgttgtacaaatttgccataaacgatggagtaagc 223
Query: 121 gtcaaaattctcactgcctaccgtctcatgttcgctggagctttcaccgttccactagct 180
|||| | | ||||||| ||||||||||| ||||| |||| |||||||||||| |||
Sbjct: 224 gtcagagtcatcactgcttaccgtctcattttcgccactgcttgcaccgttccacttgct 283
Query: 181 cttattcttgaaaggaagaacagagcaaagcttacttggagagtgcttttcatgtcattt 240
||||||||||||||||| |||||| |||| || |||||||| ||||||||||||||||||
Sbjct: 284 cttattcttgaaaggaaaaacagaccaaaactgacttggagggtgcttttcatgtcattt 343
Query: 241 atctgtggtttattaggggggagtttgttccaaaacctttatttggcatccttggccttg 300
| |||||| |||| ||||| ||||||||||||||||||||||| | || |||||||
Sbjct: 344 ttatgtggtctatttgggggaagtttgttccaaaacctttattttgagtcgatggcctta 403
Query: 301 atatcagcaacatttgcttctgcttctataaatctcgttcccgcagtcacttttattttg 360
|||||||||||||||||||| ||| | | |||||| |||| | ||| ||||||||||||
Sbjct: 404 atatcagcaacatttgcttcagctgttttcaatctcattcctggagttacttttattttg 463
Query: 361 gccatcacattcggtttagaaaaattgaaacttcacaaggcagcaggcaaggctaaggtg 420
|| || ||| |||||||||||| || || ||||||||||| |||||| |||||||||
Sbjct: 464 gctgtctcatgcggtttagaaaagttaaattttcacaaggcatcaggcatggctaaggta 523
Query: 421 cttggaacaatatcaggaattggaggggcaatgatgttgacctttctcaaaggtgtggaa 480
| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 524 ttaggaacaataacaggaattggaggggcaatgatgttgacctttttgaaaggtgtggaa 583
Query: 481 cttagcatttggcctttccatatcaacatccttcataaaaaacacactggaacacactct 540
||| ||||||||||||||| || |||||| | |||||||| |||| ||| | ||||||
Sbjct: 584 cttgacatttggcctttccacattaacatcttgcataaaaaggacacaggagcccactct 643
Query: 541 aatagtaaactacctggtatcttttgtggtcttgcaagctgcttttgttactctatatgg 600
||||||||| | | |||||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 644 aatagtaaattgcttggtattttttgtggtcttgcaagctgcttttgttactcattgtgg 703
Query: 601 ctcatcattcaggctaagatgagcaaaga 629
||||||||||| ||| |||||||||||||
Sbjct: 704 ctcatcattca-gct-agatgagcaaaga 730
>gnl|LJGI|TC60153 weakly similar to UniRef100_A2Q3V4 Cluster: Integral membrane
protein DUF6 containing protein; n=1; Medicago
truncatula|Rep: Integral membrane protein DUF6
containing protein - Medicago truncatula (Barrel medic),
partial (38%)
Length = 772
Score = 60.0 bits (30), Expect = 3e-08
Identities = 144/182 (79%)
Strand = Plus / Plus
Query: 765 tgcatggtgtgtgaggatgaaaggtccactgtatgtctctgttttcaatccagtgatgct 824
||||||||| |||||||||| ||| ||| ||| ||| ||||| ||||| || || ||||
Sbjct: 164 tgcatggtgcgtgaggatgagaggcccagtgtttgtatctgtattcaaccctttgttgct 223
Query: 825 tgtgcttacttccattgttggttccttgatactggatgagaatctttaccttggaagtgc 884
||||||| | ||||| ||| |||||||| | |||||||| | || | |||||||
Sbjct: 224 tgtgcttgtggctattgtaggtgccttgatattagatgagaacttatatgtgggaagtgt 283
Query: 885 aattggagcggttctaattatgattggattgtacatggtgttgtggggtaagcacaaaga 944
||||||||| || |||||| || ||| |||||||||||| | ||||| ||| ||||||
Sbjct: 284 aattggagctgtgctaattgtgtgtggcttgtacatggtgctatggggaaagagcaaaga 343
Query: 945 aa 946
||
Sbjct: 344 aa 345