Miyakogusa Predicted Gene
- Lj0g3v0273429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0273429.1 tr|Q00RM0|Q00RM0_ORYSA H0814G11.20 protein
OS=Oryza sativa GN=H0814G11.20 PE=4
SV=1,37.5,3e-19,DUF740,Uncharacterised protein family
UPF0503,CUFF.18105.1
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66865 similar to UniRef100_A7NVD2 Cluster: Chromosome... 640 0.0
gnl|LJGI|GO010302 similar to UniRef100_A7NVD2 Cluster: Chromosom... 575 e-163
gnl|LJGI|TC81291 similar to UniRef100_A7NVD2 Cluster: Chromosome... 474 e-133
>gnl|LJGI|TC66865 similar to UniRef100_A7NVD2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 998
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 1 atgaataatagaagcggattcagagaagagaaaccatgctgctacttccacccaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgaataatagaagcggattcagagaagagaaaccatgctgctacttccacccaaaacaa 161
Query: 61 gtagtagttggtgtttgccctttgtgcttgaatgagaggctcctcattgtagctgcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gtagtagttggtgtttgccctttgtgcttgaatgagaggctcctcattgtagctgcaaca 221
Query: 121 cagggccaacactccaagaaccgttcctccaaagcttcaaacaaggttcaaagttctgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cagggccaacactccaagaaccgttcctccaaagcttcaaacaaggttcaaagttctgta 281
Query: 181 cacacaaaaccagcctcttccattcacaagatctttgcttttggttctctcttcagtcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cacacaaaaccagcctcttccattcacaagatctttgcttttggttctctcttcagtcgc 341
Query: 241 caagaatggaaatctgataattttgactgtgatgttacctctcccagtccagaagactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caagaatggaaatctgataattttgactgtgatgttacctctcccagtccagaagactca 401
Query: 301 tttatctcaatcaagtttgaaga 323
|||||||||||||||||||||||
Sbjct: 402 tttatctcaatcaagtttgaaga 424
Score = 575 bits (290), Expect = e-163
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 323 agagcacggtctctaataaggtgtcccttgagaattgcaacaacaagatgtcatggaacc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agagcacggtctctaataaggtgtcccttgagaattgcaacaacaagatgtcatggaacc 507
Query: 383 atcaccaaaacaacaagggtaccaccaccaccatcaagagcgtgatagagcatggcaagt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atcaccaaaacaacaagggtaccaccaccaccatcaagagcgtgatagagcatggcaagt 567
Query: 443 cacgtgatgcgtttaggtggcgaaagcggataggccacatgttccagctcatccggtgga 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cacgtgatgcgtttaggtggcgaaagcggataggccacatgttccagctcatccggtgga 627
Query: 503 agaaaggcacgtgccacgtcagcagcaacaccagcaaggtggaaggtgtgaaggtgagaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agaaaggcacgtgccacgtcagcagcaacaccagcaaggtggaaggtgtgaaggtgagaa 687
Query: 563 aaggttggatgatgaggactctgacaaagaggaagaagaccatggaataa 612
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaggttggatgatgaggactctgacaaagaggaagaagaccatggaataa 737
>gnl|LJGI|GO010302 similar to UniRef100_A7NVD2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 669
Score = 575 bits (290), Expect = e-163
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 323 agagcacggtctctaataaggtgtcccttgagaattgcaacaacaagatgtcatggaacc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agagcacggtctctaataaggtgtcccttgagaattgcaacaacaagatgtcatggaacc 371
Query: 383 atcaccaaaacaacaagggtaccaccaccaccatcaagagcgtgatagagcatggcaagt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atcaccaaaacaacaagggtaccaccaccaccatcaagagcgtgatagagcatggcaagt 431
Query: 443 cacgtgatgcgtttaggtggcgaaagcggataggccacatgttccagctcatccggtgga 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cacgtgatgcgtttaggtggcgaaagcggataggccacatgttccagctcatccggtgga 491
Query: 503 agaaaggcacgtgccacgtcagcagcaacaccagcaaggtggaaggtgtgaaggtgagaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agaaaggcacgtgccacgtcagcagcaacaccagcaaggtggaaggtgtgaaggtgagaa 551
Query: 563 aaggttggatgatgaggactctgacaaagaggaagaagaccatggaataa 612
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaggttggatgatgaggactctgacaaagaggaagaagaccatggaataa 601
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 294 agactcatttatctcaatcaagtttgaaga 323
||||||||||||||||||||||||||||||
Sbjct: 259 agactcatttatctcaatcaagtttgaaga 288
>gnl|LJGI|TC81291 similar to UniRef100_A7NVD2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 1011
Score = 474 bits (239), Expect = e-133
Identities = 281/295 (95%)
Strand = Plus / Plus
Query: 1 atgaataatagaagcggattcagagaagagaaaccatgctgctacttccacccaaaacaa 60
||||| ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 89 atgaacaatagaaatggattcaaagaagagaaaccatgctgctacttccaccctaaacaa 148
Query: 61 gtagtagttggtgtttgccctttgtgcttgaatgagaggctcctcattgtagctgcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gtagtagttggtgtttgccctttgtgcttgaatgagaggctcctcattgtagctgcaaca 208
Query: 121 cagggccaacactccaagaaccgttcctccaaagcttcaaacaaggttcaaagttctgta 180
|||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 209 cagggccaccactgcaagaaccgttcctccaaagcttcaaacaagattcaaaattctgta 268
Query: 181 cacacaaaaccagcctcttccattcacaagatctttgcttttggttctctcttcagtcgc 240
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 269 cacacaaaaccatcctcttccattcacaagatctttgctttcggttctctcttcactcgc 328
Query: 241 caagaatggaaatctgataattttgactgtgatgttacctctcccagtccagaag 295
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 329 caagaatggaaatctgataattttaactgtgatgtttcctctcccagtccagaag 383