Miyakogusa Predicted Gene
- Lj0g3v0273379.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0273379.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.15,0,no
description,NULL; AAA_2,ATPase, AAA-2; ClpB_D2-small,Clp ATPase,
C-terminal; clpX: ATP-dependent ,CUFF.18118.1
(2358 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69133 similar to UniRef100_A7Q7Q4 Cluster: Chromosome... 1199 0.0
gnl|LJGI|TC78728 similar to UniRef100_A7Q7Q4 Cluster: Chromosome... 985 0.0
gnl|LJGI|TC67637 747 0.0
gnl|LJGI|TC82703 similar to UniRef100_Q06HR0 Cluster: ATP depend... 563 e-159
gnl|LJGI|TC75694 similar to UniRef100_A7Q7Q4 Cluster: Chromosome... 133 6e-30
gnl|LJGI|TC65198 similar to UniRef100_O48566 Cluster: CLP protea... 109 8e-23
gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protea... 92 2e-17
gnl|LJGI|TC67655 similar to UniRef100_A7QF37 Cluster: Chromosome... 64 4e-09
gnl|LJGI|TC59225 similar to UniRef100_A7QF37 Cluster: Chromosome... 64 4e-09
>gnl|LJGI|TC69133 similar to UniRef100_A7Q7Q4 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 733
Score = 1199 bits (605), Expect = 0.0
Identities = 628/637 (98%), Gaps = 9/637 (1%)
Strand = Plus / Plus
Query: 1 atgtatgtgtctttgcgtttcgcagctttctttctttctccgataaacactcttaaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 atgtatgtgtctttgcgtttcgcagctttctttctttctccgataaacactcttaaactt 156
Query: 61 tatcttactcctcaatcttctcccctccaatccaattttcccttcattttctccctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tatcttactcctcaatcttctcccctccaatccaattttcccttcattttctccctctct 216
Query: 121 ttcacttccttcccactcacacaactcataataaattcacgcaaaccacgcttaattcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ttcacttccttcccactcacacaactcataataaattcacgcaaaccacgcttaattcag 276
Query: 181 atccaaacttcttcctcaattctcactcgatcaatccatttttcttccaaatcaaaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atccaaacttcttcctcaattctcactcgatcaatccatttttcttccaaatcaaaattc 336
Query: 241 ttcacatcatccatgtatcgaatcttctctagatggagaaacgtgaacgaaatcacgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttcacatcatccatgtatcgaatcttctctagatggagaaacgtgaacgaaatcacgtca 396
Query: 301 ctttccggtcgaaccgggttcaacagggttcgaccaatctcgacccatctgaatcacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctttccggtcgaaccgggttcaacagggttcgaccaatctcgacccatctgaatcacttc 456
Query: 361 atcgtctccggcggcgcacatcgccgccgtgagtcgctggttggcgttcaggagcggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atcgtctccggcggcgcacatcgccgccgtgagtcgctggttggcgttcaggagcggtac 516
Query: 421 aagtgggaccgcggtggctccgatgacggtagtacccataacacgacccggaagattcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aagtgggaccgcggtggctccgatgacggtagtacccataacacgacccggaagattcgg 576
Query: 481 gctgaggcgaattgcccacgttgtaccaaggacatgaaccttattttctccaatcgccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gctgaggcgaattgcccacgttgtaccaaggacatgaaccttattttctccaatcgccat 636
Query: 541 tttcctgctaccagtgattctgattgtggttccaattctggttcttc---------tggt 591
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 637 tttcctgctaccagtgattctgattgtggttccaattctggttcttctggtggtggtggt 696
Query: 592 ggtggtggaggaggagaaggtggtggttatcaagcgg 628
|||||||||||||||||||||||||||||||||||||
Sbjct: 697 ggtggtggaggaggagaaggtggtggttatcaagcgg 733
>gnl|LJGI|TC78728 similar to UniRef100_A7Q7Q4 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 497
Score = 985 bits (497), Expect = 0.0
Identities = 497/497 (100%)
Strand = Plus / Plus
Query: 233 caaaattcttcacatcatccatgtatcgaatcttctctagatggagaaacgtgaacgaaa 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaattcttcacatcatccatgtatcgaatcttctctagatggagaaacgtgaacgaaa 60
Query: 293 tcacgtcactttccggtcgaaccgggttcaacagggttcgaccaatctcgacccatctga 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacgtcactttccggtcgaaccgggttcaacagggttcgaccaatctcgacccatctga 120
Query: 353 atcacttcatcgtctccggcggcgcacatcgccgccgtgagtcgctggttggcgttcagg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcacttcatcgtctccggcggcgcacatcgccgccgtgagtcgctggttggcgttcagg 180
Query: 413 agcggtacaagtgggaccgcggtggctccgatgacggtagtacccataacacgacccgga 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcggtacaagtgggaccgcggtggctccgatgacggtagtacccataacacgacccgga 240
Query: 473 agattcgggctgaggcgaattgcccacgttgtaccaaggacatgaaccttattttctcca 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agattcgggctgaggcgaattgcccacgttgtaccaaggacatgaaccttattttctcca 300
Query: 533 atcgccattttcctgctaccagtgattctgattgtggttccaattctggttcttctggtg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcgccattttcctgctaccagtgattctgattgtggttccaattctggttcttctggtg 360
Query: 593 gtggtggaggaggagaaggtggtggttatcaagcggtgaatctgtgtccaagttgcaaca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggtggaggaggagaaggtggtggttatcaagcggtgaatctgtgtccaagttgcaaca 420
Query: 653 ctgcttattacttcaggcctaacaatactacacctttgcaaggtacctttgtggagattg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgcttattacttcaggcctaacaatactacacctttgcaaggtacctttgtggagattg 480
Query: 713 gtagagtcagtactaac 729
|||||||||||||||||
Sbjct: 481 gtagagtcagtactaac 497
>gnl|LJGI|TC67637
Length = 1030
Score = 747 bits (377), Expect = 0.0
Identities = 656/749 (87%)
Strand = Plus / Plus
Query: 1581 cttaaatatcagcagggatgtttctggcgagggggttcagcaggcattattaaaaatgct 1640
||||||||| ||| ||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 1 cttaaatattagccgggatgtttctggtgagggtgttcagcaggcattattgaaaatgct 60
Query: 1641 ggaaggaactatagtaaatgttccagagaaaggagccaggaaacatccacggggagaaaa 1700
|||||||||||||||||||||||| ||||||||||| ||||| || |||||||| || ||
Sbjct: 61 ggaaggaactatagtaaatgttcctgagaaaggagcaaggaagcacccacggggtgataa 120
Query: 1701 cattcagatggacacaaagaatattctttttatatgcggtggagcatttattgatcttga 1760
||||||||| ||||||||| ||||||| |||||||| || ||||||||||| ||||||||
Sbjct: 121 cattcagattgacacaaaggatattctctttatatgtgggggagcatttatcgatcttga 180
Query: 1761 aaaaaccatttcagagagacgacaggattcttctattggttttggagcaccagttcgtgc 1820
|||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 181 gaaaaccatctcagagagacgacaagattcttctattggttttggagcaccagtccgtgc 240
Query: 1821 caacatgagaactggtagaatagtagattctgcagtaacatcatctttacttgaaacggt 1880
||| |||||| || || || || | || ||||||| ||||||||||||||||| ||||
Sbjct: 241 caatatgagagctagtggagtaacacatgctgcagtcacatcatctttacttgagtcggt 300
Query: 1881 ggaaagtgctgatctaattgcatatggcctcataccagagtttattggacgattccccat 1940
||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| || ||
Sbjct: 301 ggaaagttctgatcttattgcatatggtctcataccagagtttataggacgatttcctat 360
Query: 1941 cttagttagcttgtcagctttaacagaagaccaacttatgcaggtcctcacagaaccaaa 2000
||| |||||||||||||| | || |||||||||||||||||||| ||||||||||||||
Sbjct: 361 cttgattagcttgtcagctcttactgaagaccaacttatgcaggtgctcacagaaccaaa 420
Query: 2001 gaatgctcttggcaagcagtacaagaaattatttagtatgaataatgtaaaactacactt 2060
|||||||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 421 taatgctcttgctaagcagtacaaaaaattatttagcatgaataatgtaaagctacactt 480
Query: 2061 cacagagaaagctctaagacttatagcggagaaagcaatggccaaaaatactggtgccag 2120
|||| ||||||| | ||||| || ||| | ||||||||||||||||||||||||||| |
Sbjct: 481 cacacagaaagccttgagactaattgcgaaaaaagcaatggccaaaaatactggtgcccg 540
Query: 2121 gggtttaagagccctaattgaaagcattttaactgaatccatgtttgagattccagatat 2180
||||||||||||||| || |||||||||||||||||| | |||||||||||||||||| |
Sbjct: 541 gggtttaagagccctcatggaaagcattttaactgaagcaatgtttgagattccagatgt 600
Query: 2181 taagaccggaagtgaccgggttgatgcagttgttgttgatgaagagtcagtaggatcact 2240
|| | | || ||| | | | || |||||||| |||||||| ||||||||||||||| |
Sbjct: 601 ccaggcagaaaatgagctgatcgacgcagttgtcgttgatgaggagtcagtaggatcagt 660
Query: 2241 aaatgcccctggatgtggagggaaaattcttcgcggagatggtgctttggagcagtatct 2300
| ||||||| || |||||||| ||||||||||| |||| || |||||||||||||| ||
Sbjct: 661 agatgcccccgggtgtggaggaaaaattcttcgaggaggcggcgctttggagcagtacct 720
Query: 2301 agctaagatgaaggattcagtggtaaatg 2329
|||||| ||| |||| || ||||| ||||
Sbjct: 721 agctaaaatggaggaatctgtggttaatg 749
>gnl|LJGI|TC82703 similar to UniRef100_Q06HR0 Cluster: ATP dependent Clp protease
ATP-binding subunit ClpX1; n=1; Pennisetum glaucum|Rep:
ATP dependent Clp protease ATP-binding subunit ClpX1 -
Pennisetum americanum (Pearl millet), partial (52%)
Length = 717
Score = 563 bits (284), Expect = e-159
Identities = 310/315 (98%), Gaps = 3/315 (0%)
Strand = Plus / Plus
Query: 2029 ttatttagtatgaataatgtaaaactacacttcacagagaaagctctaagacttatagcg 2088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatttagtatgaataatgtaaaactacacttcacagagaaagctctaagacttatagcg 60
Query: 2089 gagaaagcaatggccaaaaatactggtgccaggggtttaagagccctaattgaaagcatt 2148
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaagcaatgncccaaaatactggtgccaggggtttaagagccctaattgaaagcatt 120
Query: 2149 ttaactgaatccatgtttgagattccagatattaagaccggaagtgaccgggttgatgca 2208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaactgaatccatgtttgagattccagatattaagaccggaagtgaccgggttgatgca 180
Query: 2209 gttgttgttgatgaagagtcagtaggatcactaaatgcccctggatgtggagggaaaatt 2268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgttgttgatgaagagtcagtaggatcactaaatgcccctggatgtggagggaaaatt 240
Query: 2269 cttcgcggagatggtgctttggagcagtatctagc-taagatgaaggattca-gtggtaa 2326
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 241 cttcgcggagatggtgctttggagcagtatctagcntaagatgaaggattcacgtggtaa 300
Query: 2327 a-tgtagatgtagct 2340
| |||||||||||||
Sbjct: 301 antgtagatgtagct 315
>gnl|LJGI|TC75694 similar to UniRef100_A7Q7Q4 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 678
Score = 133 bits (67), Expect = 6e-30
Identities = 115/131 (87%)
Strand = Plus / Plus
Query: 1123 aatttggggaaggatttgccatcaccaaaggagatctgcaaaggtcttgacaagtttgtt 1182
|||||||| | ||||||||| | |||||||| || ||||| ||||||||||||||||||
Sbjct: 503 aatttgggtagggatttgcctactccaaaggaaatttgcaagggtcttgacaagtttgtt 562
Query: 1183 attggccaagacagagccaagaaggtgctttctgtagctgtttataaccattataaaaga 1242
||||| ||| | ||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 563 attggtcaaaattcagctaagaaggtgctttctgtggctgtttataaccactataaaaga 622
Query: 1243 atataccatgc 1253
|||||||||||
Sbjct: 623 atataccatgc 633
Score = 54.0 bits (27), Expect = 4e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 986 atggtctggctgtgcatactcctccaggccctccttttgcacc 1028
||||| ||||||||||||||||||| ||||| |||||| ||||
Sbjct: 396 atggtgtggctgtgcatactcctccgggcccaccttttccacc 438
>gnl|LJGI|TC65198 similar to UniRef100_O48566 Cluster: CLP protease regulatory subunit
CLPX precursor; n=1; Arabidopsis thaliana|Rep: CLP
protease regulatory subunit CLPX precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (29%)
Length = 808
Score = 109 bits (55), Expect = 8e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 1873 gaaacggtggaaagtgctgatctaattgcatatggcctcataccagagtttattggacga 1932
||||| || |||||| |||||||||||| ||||| | ||||| |||||| |||| ||
Sbjct: 80 gaaactgttgaaagtagtgatctaattgcgtatggtttaatacctgagtttgttgggcgg 139
Query: 1933 ttccccatcttagttagcttgtcagctttaacagaagaccaacttatgcaggtcctcaca 1992
|| || ||| | || || |||||||||||||| ||| | ||||| || ||||||||||||
Sbjct: 140 tttccgatccttgtcagtttgtcagctttaactgaaaatcaactcattcaggtcctcaca 199
Query: 1993 gaaccaaagaatgctcttggcaagcagtacaagaa 2027
|||||||||||||||||||| ||||| ||||||||
Sbjct: 200 gaaccaaagaatgctcttgggaagcaatacaagaa 234
>gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protease regulatory subunit
CLPX-like; n=1; Arabidopsis thaliana|Rep: CLP protease
regulatory subunit CLPX-like - Arabidopsis thaliana
(Mouse-ear cress), partial (35%)
Length = 1064
Score = 91.7 bits (46), Expect = 2e-17
Identities = 223/282 (79%)
Strand = Plus / Plus
Query: 1363 tcagggaagacattactggcaaaaacactagctcgatttgtcaatgttccgtttgtcatt 1422
||||||||||| || || || ||||| || || || ||||||||||||| |||| ||||
Sbjct: 779 tcagggaagaccttgctcgccaaaacgcttgcccggattgtcaatgttccatttgccatt 838
Query: 1423 gctgatgcaacaaccttaacacaggccggttatgttggagaggatgttgaatcgatacta 1482
|||||||| || || || || ||||| |||||||||||||| |||||||| || ||| ||
Sbjct: 839 gctgatgctaccactttcacgcaggctggttatgttggagaagatgttgagtcaatatta 898
Query: 1483 cataaactactagcggcagcagatttcaatgttgcagcagctcaacaaggaataatttac 1542
|||| || || | || ||| |||||| | || | | |||||| | ||| || | |||
Sbjct: 899 tataagcttcttgtggaagctgatttcgacgtggaattagctcagcgagggattgtctac 958
Query: 1543 attgatgaagttgacaagataactaagaaggctgagagcttaaatatcagcagggatgtt 1602
||||||||||||| ||||| |||||||||| || || || || || | ||||||||
Sbjct: 959 gttgatgaagttgataagattactaagaagggagaaagtttgaacattggaagggatgta 1018
Query: 1603 tctggcgagggggttcagcaggcattattaaaaatgctggaa 1644
||||| |||||||| |||||||| || | ||||||||||||
Sbjct: 1019 tctggggagggggtccagcaggccttgctcaaaatgctggaa 1060
>gnl|LJGI|TC67655 similar to UniRef100_A7QF37 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 930
Score = 63.9 bits (32), Expect = 4e-09
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 1150 aaggagatctgcaaaggtcttgacaagtttgttattggccaagacagagccaagaaggtg 1209
|||||||| || || || ||||||||||| || ||||| || || || ||||||||||||
Sbjct: 763 aaggagatttgtaaggggcttgacaagttcgtgattggacaggagagggccaagaaggtg 822
Query: 1210 ctttctgtagctgtttataa 1229
|||||||| || ||||||||
Sbjct: 823 ctttctgtggcagtttataa 842
>gnl|LJGI|TC59225 similar to UniRef100_A7QF37 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 821
Score = 63.9 bits (32), Expect = 4e-09
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 1150 aaggagatctgcaaaggtcttgacaagtttgttattggccaagacagagccaagaaggtg 1209
|||||||| || || || ||||||||||| || ||||| || || || ||||||||||||
Sbjct: 529 aaggagatttgtaaggggcttgacaagttcgtgattggacaggagagggccaagaaggtg 588
Query: 1210 ctttctgtagctgtttataa 1229
|||||||| || ||||||||
Sbjct: 589 ctttctgtggcagtttataa 608