Miyakogusa Predicted Gene
- Lj0g3v0273289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0273289.1 tr|G7KQ38|G7KQ38_MEDTR KTEL motif-containing
protein OS=Medicago truncatula GN=MTR_6g031170 PE=4
SV=,74.27,0,seg,NULL; coiled-coil,NULL; Putative
lipopolysaccharide-modifying
enzyme,Lipopolysaccharide-modifyin,CUFF.18076.1
(1548 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS330901 similar to UniRef100_Q9SH28 Cluster: F2K11.20;... 1447 0.0
gnl|LJGI|FS357087 similar to UniRef100_A7PZA5 Cluster: Chromosom... 1082 0.0
gnl|LJGI|BP055755 210 2e-53
gnl|LJGI|TC71387 similar to UniRef100_A7PZA5 Cluster: Chromosome... 70 5e-11
gnl|LJGI|TC75333 similar to UniRef100_A7QZ64 Cluster: Chromosome... 60 4e-08
gnl|LJGI|TC78353 weakly similar to UniRef100_Q2HRE8 Cluster: Lip... 56 7e-07
>gnl|LJGI|FS330901 similar to UniRef100_Q9SH28 Cluster: F2K11.20; n=1; Arabidopsis
thaliana|Rep: F2K11.20 - Arabidopsis thaliana (Mouse-ear
cress), partial (19%)
Length = 765
Score = 1447 bits (730), Expect = 0.0
Identities = 730/730 (100%)
Strand = Plus / Plus
Query: 1 atgaacaaggacaaccacagatatctcaaactcttctggggaacttctaatcaacacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atgaacaaggacaaccacagatatctcaaactcttctggggaacttctaatcaacacaag 95
Query: 61 tttaagaagccaaaagctacaacaaaaacagttactaccaccgtgattgtggtgttttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tttaagaagccaaaagctacaacaaaaacagttactaccaccgtgattgtggtgttttgc 155
Query: 121 ttagcagcaactttctgtgctttagcagcctggatttcctccccatttgcaggtgcttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttagcagcaactttctgtgctttagcagcctggatttcctccccatttgcaggtgcttgc 215
Query: 181 attccaaaccagaacctcccagccactcacctagccaaaccccaagaatcacaagagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 attccaaaccagaacctcccagccactcacctagccaaaccccaagaatcacaagagttt 275
Query: 241 tctcttagatgcaccaaaagtaagaacaacaaagagacaaaacaaacctgcccaagagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tctcttagatgcaccaaaagtaagaacaacaaagagacaaaacaaacctgcccaagagac 335
Query: 301 aactaccccacctcacatagccctagcaatccacagaacctgacatgtccctcatacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aactaccccacctcacatagccctagcaatccacagaacctgacatgtccctcatacttc 395
Query: 361 agatggatccatgaagatctaaaaccatggaaagagaaaggagggatcacaaggcagatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agatggatccatgaagatctaaaaccatggaaagagaaaggagggatcacaaggcagatg 455
Query: 421 ttggaaggtgtaagaaggacagcacacttcaggcttgtgattgtggatgggaaagtgtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttggaaggtgtaagaaggacagcacacttcaggcttgtgattgtggatgggaaagtgtat 515
Query: 481 gtggagaagtttagacagtctattcagacaagagatgtgtttacattgtggggaattttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtggagaagtttagacagtctattcagacaagagatgtgtttacattgtggggaattttg 575
Query: 541 cagcttctgagagtgtaccctggaaagttgcctgatttggagctcatgtttgattgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cagcttctgagagtgtaccctggaaagttgcctgatttggagctcatgtttgattgtgat 635
Query: 601 gacaggcctgtcattcacttggccaattttcaaggcccaaaagctgccccaccaccattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gacaggcctgtcattcacttggccaattttcaaggcccaaaagctgccccaccaccattg 695
Query: 661 tttagatattgttctgatcaggggagcttggatattgttttccctgattggtccttttgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tttagatattgttctgatcaggggagcttggatattgttttccctgattggtccttttgg 755
Query: 721 ggatgggctg 730
||||||||||
Sbjct: 756 ggatgggctg 765
>gnl|LJGI|FS357087 similar to UniRef100_A7PZA5 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (48%)
Length = 658
Score = 1082 bits (546), Expect = 0.0
Identities = 546/546 (100%)
Strand = Plus / Minus
Query: 1003 ggatgggcttggtctgttagtgagaaatacattatggcatgtaattctatgtcattatat 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ggatgggcttggtctgttagtgagaaatacattatggcatgtaattctatgtcattatat 599
Query: 1063 gtcaagtctagctaccatgactttttcatcagaggcatgaagccattacagcactattgg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtcaagtctagctaccatgactttttcatcagaggcatgaagccattacagcactattgg 539
Query: 1123 cccataagagacaacagcaaatgcacatctcttaagtatgcagtggaatggggcaacaac 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cccataagagacaacagcaaatgcacatctcttaagtatgcagtggaatggggcaacaac 479
Query: 1183 cacactgataaggcacaagcaataggggaggctgctagcagattcatacaagaggactta 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cacactgataaggcacaagcaataggggaggctgctagcagattcatacaagaggactta 419
Query: 1243 gacatggatcatgtatacgactacatgtttcatctactgaatgaatatgcaaagctctta 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gacatggatcatgtatacgactacatgtttcatctactgaatgaatatgcaaagctctta 359
Query: 1303 aagttcaaaccaactgtccctccaggagctgtggagttttgtcctgaaacattggcatgt 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aagttcaaaccaactgtccctccaggagctgtggagttttgtcctgaaacattggcatgt 299
Query: 1363 gctgtaaatggtacacagagaaggttcatggaggagtcaatggtgaagtttcctagtcac 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gctgtaaatggtacacagagaaggttcatggaggagtcaatggtgaagtttcctagtcac 239
Query: 1423 tcaaatccatgcactattcctcctccatatgatccttcaaccttccaaagctttcaagag 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tcaaatccatgcactattcctcctccatatgatccttcaaccttccaaagctttcaagag 179
Query: 1483 gaaaaagctaatgcaacaagacaggttgaaatttgggaagataaatactggcttaagaaa 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gaaaaagctaatgcaacaagacaggttgaaatttgggaagataaatactggcttaagaaa 119
Query: 1543 aattag 1548
||||||
Sbjct: 118 aattag 113
>gnl|LJGI|BP055755
Length = 273
Score = 210 bits (106), Expect = 2e-53
Identities = 136/146 (93%)
Strand = Plus / Minus
Query: 1403 tggtgaagtttcctagtcactcaaatccatgcactattcctcctccatatgatccttcaa 1462
|||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct: 273 tggtgaagtttcctagtcactccaatccctgccctattcctcctccatatgatccttcca 214
Query: 1463 ccttccaaagctttcaagaggaaaaagctaatgcaacaagacaggttgaaatttgggaag 1522
|||||| |||||||||||||| ||||||| |||| || |||| |||||||||||||||||
Sbjct: 213 ccttcccaagctttcaagagggaaaagcttatgccaccagaccggttgaaatttgggaag 154
Query: 1523 ataaatactggcttaagaaaaattag 1548
||||||||||||||||||||||||||
Sbjct: 153 ataaatactggcttaagaaaaattag 128
>gnl|LJGI|TC71387 similar to UniRef100_A7PZA5 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1931
Score = 69.9 bits (35), Expect = 5e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 529 tggggaattttgcagcttctgagagtgtaccctggaaagttgcctgatttggagctcatg 588
||||| ||| |||| ||||||||| ||| || || ||| |||| ||||||||||| |||
Sbjct: 703 tggggcattctgcaacttctgagaaggtatccagggaaggtgccagatttggagcttatg 762
Query: 589 tttgattgtgatgacaggcctgt 611
|||||||||||||||| ||||||
Sbjct: 763 tttgattgtgatgacaagcctgt 785
Score = 61.9 bits (31), Expect = 1e-08
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 968 accaatgcactcataggtataagatatacatagaaggatgggcttggtctgttagtgaga 1027
|||||||||| |||| |||||||| || |||||||||| || |||||||| |||||||
Sbjct: 1145 accaatgcacatatagatataagatttatatagaaggatccgcatggtctgtgagtgaga 1204
Query: 1028 aatacat 1034
|||||||
Sbjct: 1205 aatacat 1211
>gnl|LJGI|TC75333 similar to UniRef100_A7QZ64 Cluster: Chromosome undetermined
scaffold_265, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_265, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(55%)
Length = 876
Score = 60.0 bits (30), Expect = 4e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 969 ccaatgcactcataggtataagatatacatagaaggatgggcttggtctgttagtgagaa 1028
|||||||| ||| ||||||||| | ||||| ||||| | ||||||||||| ||||| ||
Sbjct: 171 ccaatgcaatcacaggtataaggtttacatcgaaggttctgcttggtctgtcagtgaaaa 230
Query: 1029 atacattatggcatgtaattct 1050
|||||| |||||||| |||||
Sbjct: 231 gtacattctggcatgtgattct 252
>gnl|LJGI|TC78353 weakly similar to UniRef100_Q2HRE8 Cluster:
Lipopolysaccharide-modifying protein; n=1; Medicago
truncatula|Rep: Lipopolysaccharide-modifying protein -
Medicago truncatula (Barrel medic), partial (51%)
Length = 807
Score = 56.0 bits (28), Expect = 7e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 1264 tacatgtttcatctactgaatgaatatgcaaagctcttaaagttcaaaccaactgtccct 1323
||||||||||| || || ||| | |||||||||||||| || ||||||||||| | |||
Sbjct: 446 tacatgtttcacctgctaaataactatgcaaagctcttgaaattcaaaccaacaatacct 505
Query: 1324 ccaggagctgtggagttttgtcctgaaa 1351
||| |||||| ||| ||||| ||||||
Sbjct: 506 gcagaagctgttgaggtttgttctgaaa 533