Miyakogusa Predicted Gene
- Lj0g3v0273199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0273199.1 CUFF.18065.1
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60064 1788 0.0
gnl|LJGI|TC69848 weakly similar to UniRef100_A2Q1U7 Cluster: Cyc... 755 0.0
gnl|LJGI|FS329415 similar to UniRef100_Q2HUI7 Cluster: Cyclin-li... 184 7e-46
gnl|LJGI|GO015698 weakly similar to UniRef100_A2Q1U7 Cluster: Cy... 131 9e-30
gnl|LJGI|BW596571 weakly similar to UniRef100_A2Q1U7 Cluster: Cy... 131 9e-30
gnl|LJGI|TC65375 weakly similar to UniRef100_A2Q1U7 Cluster: Cyc... 131 9e-30
gnl|LJGI|FS355536 113 2e-24
gnl|LJGI|DC599890 similar to UniRef100_A7QK60 Cluster: Chromosom... 103 2e-21
gnl|LJGI|TC64714 similar to UniRef100_Q2HUK1 Cluster: FBD; n=1; ... 80 3e-14
gnl|LJGI|TC63810 weakly similar to UniRef100_A7QK65 Cluster: Chr... 70 3e-11
gnl|LJGI|TC74716 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik... 64 2e-09
gnl|LJGI|FS329231 similar to UniRef100_A2Q1U7 Cluster: Cyclin-li... 52 6e-06
>gnl|LJGI|TC60064
Length = 1179
Score = 1788 bits (902), Expect = 0.0
Identities = 916/920 (99%), Gaps = 1/920 (0%)
Strand = Plus / Plus
Query: 1 atggagaatcgattgaagatgaattcctaccagagacgccgcaacctcatggctgacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atggagaatcgattgaagatgaattcctaccagagacgccgcaacctcatggctgacaga 110
Query: 61 atcagcacgttgccagatcgaagctatctcataatcaacagatcctataatggcttttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atcagcacgttgccagatcgaagctatctcataatcaacagatcctataatggcttttca 170
Query: 121 aagtttatatatagaaccatgcgcaacagagatcaccaccaaccaatcaccacctttcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aagtttatatatagaaccatgcgcaacagagatcaccaccaaccaatcaccacctttcgt 230
Query: 181 ctccaatgtggctcttcgcatttcaacctttctgatgtcaatagatgggtcaactctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ctccaatgtggctcttcgcatttcaacctttctgatgtcaatagatgggtcaactctgca 290
Query: 241 gtacaacgtggacttgagaatctctacatccagctgttctatcaaatttttccaaaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gtacaacgtggacttgagaatctctacatccagctgttctatcaaatttttccaaaattg 350
Query: 301 atcaaaagctgcattttcagctgcaagactcttgttgttctcaagttgtttgggttaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atcaaaagctgcattttcagctgcaagactcttgttgttctcaagttgtttgggttaaac 410
Query: 361 gtggatgtattttcttttgttcaccttccttcgctcaaaactttgcagttgtattgcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtggatgtattttcttttgttcaccttccttcgctcaaaactttgcagttgtattgcctt 470
Query: 421 atttttccagaaccgcaatatgttatggaacttctttctgggtgtccaattcttgagtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atttttccagaaccgcaatatgttatggaacttctttctgggtgtccaattcttgagtat 530
Query: 481 atgcatttgagcagaatgcgttatgctgactgttctagtcctagtaataccaacgttaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atgcatttgagcagaatgcgttatgctgactgttctagtcctagtaataccaacgttaaa 590
Query: 541 agcttaactaagttggtcagtgcagatatatctttcattggctttgaaattcctctgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agcttaactaagttggtcagtgcagatatatctttcattggctttgaaattcctctgaaa 650
Query: 601 gtgatttgtaatgtagaatttcttcgcattgacaagtacccttatgaaattccagttttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtgatttgtaatgtagaatttcttcgcattgacaagtacccttatgaaattccagttttt 710
Query: 661 cccaatttaactcatctggagctcatgatgtcgggtattggtatgaactggcatttggta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cccaatttaactcatctggagctcatgatgtcgggtattggtatgaactggcatttggta 770
Query: 721 cttgcgatgctcaagaagtgcccaaagctgcaaaagttgttacttgatatgaaggcaagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 cttgcgatgctcaagaagtgcccaaagctgcaaaagttgttacttgatatgaaggcaagt 830
Query: 781 tctactcatgatatggtttggacttcccccttcaatgatcctgagtgtctttcttcacag 840
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 831 tctactcatgatatggtttggacttcccccttcaatgatcctgantgtctttcttcacag 890
Query: 841 cttaggaagtgttccattacaaattataaaggcacgaaaag-tgagctgcattttgcaac 899
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 891 cttangaagtgttccattacaaattataaaggcacgaaaagttgagctgcattttgcaac 950
Query: 900 atatattatgcagagttcca 919
|||||||||||||| |||||
Sbjct: 951 atatattatgcagaattcca 970
>gnl|LJGI|TC69848 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (17%)
Length = 651
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 550 aagttggtcagtgcagatatatctttcattggctttgaaattcctctgaaagtgatttgt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagttggtcagtgcagatatatctttcattggctttgaaattcctctgaaagtgatttgt 60
Query: 610 aatgtagaatttcttcgcattgacaagtacccttatgaaattccagtttttcccaattta 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgtagaatttcttcgcattgacaagtacccttatgaaattccagtttttcccaattta 120
Query: 670 actcatctggagctcatgatgtcgggtattggtatgaactggcatttggtacttgcgatg 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actcatctggagctcatgatgtcgggtattggtatgaactggcatttggtacttgcgatg 180
Query: 730 ctcaagaagtgcccaaagctgcaaaagttgttacttgatatgaaggcaagttctactcat 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcaagaagtgcccaaagctgcaaaagttgttacttgatatgaaggcaagttctactcat 240
Query: 790 gatatggtttggacttcccccttcaatgatcctgagtgtctttcttcacagcttaggaag 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatatggtttggacttcccccttcaatgatcctgagtgtctttcttcacagcttaggaag 300
Query: 850 tgttccattacaaattataaaggcacgaaaagtgagctgcattttgcaacatatattatg 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgttccattacaaattataaaggcacgaaaagtgagctgcattttgcaacatatattatg 360
Query: 910 cagagttccagagttttacag 930
|||||||||||||||||||||
Sbjct: 361 cagagttccagagttttacag 381
>gnl|LJGI|FS329415 similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD; Zinc
finger FYVE/PHD-type; n=1; Medicago truncatula|Rep:,
partial (2%)
Length = 498
Score = 184 bits (93), Expect = 7e-46
Identities = 232/277 (83%), Gaps = 6/277 (2%)
Strand = Plus / Plus
Query: 654 agtttttcccaatttaactcatctggagctcatgatgtcgggtattggtatgaactggca 713
|||||||||||||||||||| | |||||||| || || ||||||||||||||||||||
Sbjct: 60 agtttttcccaatttaactcgtgtggagctcgtgttg---ggtattggtatgaactggca 116
Query: 714 tttggtacttgcgatgctcaagaagtgcccaaagctgcaaaagttgttacttgatatgaa 773
|||||||| || |||||||||||||||||| ||||| |||| || | || |||||| |
Sbjct: 117 tttggtacgtgggatgctcaagaagtgcccgaagcttcaaatttttgtcctagatatgca 176
Query: 774 ggcaagttctactcatgatatggtttggacttcccccttcaatgatcctgagtgtctttc 833
| ||||||| |||||| || |||||| ||||| | || |||||| ||| ||||
Sbjct: 177 gataagttctgctcatg---tgatttggatatccccttatcttgttcctgaatgtatttc 233
Query: 834 ttcacagcttaggaagtgttccattacaaattataaaggcacgaaaagtgagctgcattt 893
||||||||||||||||||||| ||||| ||||||| ||||| |||||||||| ||||||
Sbjct: 234 ttcacagcttaggaagtgttctattactaattatagcggcacaaaaagtgagcagcattt 293
Query: 894 tgcaacatatattatgcagagttccagagttttacag 930
||||| |||||| ||||||| ||| ||||||||||||
Sbjct: 294 tgcaaaatatatgatgcagaattcaagagttttacag 330
>gnl|LJGI|GO015698 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 764
Score = 131 bits (66), Expect = 9e-30
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 819 tcctgagtgtctttcttcacagcttaggaagtgttccattacaaattataaaggcacgaa 878
|||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| | |
Sbjct: 339 tcctgaatgtctttcttcacagcttaggaaatgttccattataaattatgcaggcaggga 280
Query: 879 aagtgagctgcattttgcaacatatattatgcagagttccagagttttac 928
|||||||||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct: 279 aagtgagctgcattttgcaaaatatattatgcagaattcaaaagttttac 230
Score = 58.0 bits (29), Expect = 1e-07
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 424 tttccagaaccgcaatatgttatggaacttctttctgggtgtccaattcttgagtatatg 483
|||||||||||||| | | || |||| |||||| |||| ||||||| |||||||||||||
Sbjct: 722 tttccagaaccgcagtgtcttgtggatcttcttgctggatgtccaaatcttgagtatatg 663
Query: 484 c 484
|
Sbjct: 662 c 662
Score = 54.0 bits (27), Expect = 2e-06
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 629 ttgacaagtacccttatgaaattccagtttttcccaatttaactcatctggagct 683
|||||||||||| |||| |||| | |||||||||||||||||||| |||||||
Sbjct: 532 ttgacaagtacctggatgacattctactttttcccaatttaactcatgtggagct 478
>gnl|LJGI|BW596571 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 486
Score = 131 bits (66), Expect = 9e-30
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 819 tcctgagtgtctttcttcacagcttaggaagtgttccattacaaattataaaggcacgaa 878
|||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| | |
Sbjct: 271 tcctgaatgtctttcttcacagcttaggaaatgttccattataaattatgcaggcaggga 330
Query: 879 aagtgagctgcattttgcaacatatattatgcagagttccagagttttac 928
|||||||||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct: 331 aagtgagctgcattttgcaaaatatattatgcagaattcaaaagttttac 380
>gnl|LJGI|TC65375 weakly similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD;
n=1; Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 627
Score = 131 bits (66), Expect = 9e-30
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 819 tcctgagtgtctttcttcacagcttaggaagtgttccattacaaattataaaggcacgaa 878
|||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| | |
Sbjct: 234 tcctgaatgtctttcttcacagcttaggaaatgttccattataaattatgcaggcaggga 293
Query: 879 aagtgagctgcattttgcaacatatattatgcagagttccagagttttac 928
|||||||||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct: 294 aagtgagctgcattttgcaaaatatattatgcagaattcaaaagttttac 343
>gnl|LJGI|FS355536
Length = 711
Score = 113 bits (57), Expect = 2e-24
Identities = 120/141 (85%)
Strand = Plus / Minus
Query: 788 atgatatggtttggacttcccccttcaatgatcctgagtgtctttcttcacagcttagga 847
||||| |||||||||||||||||| || |||||| || ||||||||||||||||| |
Sbjct: 391 atgatttggtttggacttccccctgttttgttcctgaatgcctttcttcacagcttagaa 332
Query: 848 agtgttccattacaaattataaaggcacgaaaagtgagctgcattttgcaacatatatta 907
| ||||| |||| ||||| | ||||||| |||||| |||| ||||||||| ||||||||
Sbjct: 331 aatgttctattataaattgtgaaggcacagaaagtgggctgtattttgcaaaatatatta 272
Query: 908 tgcagagttccagagttttac 928
|||||| ||| ||||||||||
Sbjct: 271 tgcagaattcaagagttttac 251
>gnl|LJGI|DC599890 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 598
Score = 103 bits (52), Expect = 2e-21
Identities = 138/167 (82%)
Strand = Plus / Plus
Query: 311 gcattttcagctgcaagactcttgttgttctcaagttgtttgggttaaacgtggatgtat 370
|||||||||||||||| ||||| ||||||||||||||| ||| |||| ||||||||||||
Sbjct: 423 gcattttcagctgcaaaactctggttgttctcaagttgattgcgttagacgtggatgtat 482
Query: 371 tttcttttgttcaccttccttcgctcaaaactttgcagttgtattgccttatttttccag 430
||||| || ||||||||| |||| ||||||||| ||| ||| || |||| |
Sbjct: 483 tttctatttcggaccttcctttcctcanaactttgcatttggattatgttgagtttcgcg 542
Query: 431 aaccgcaatatgttatggaacttctttctgggtgtccaattcttgag 477
|||| | ||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 543 gaccgaattatcttatgaaacttctttctgggtgtccagttcttgag 589
Score = 61.9 bits (31), Expect = 7e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 48 catggctgacagaatcagcacgttgccagat 78
|||||||||||||||||||||||||||||||
Sbjct: 34 catggctgacagaatcagcacgttgccagat 64
Score = 61.9 bits (31), Expect = 7e-09
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 114 cttttcaaagtttatatatagaaccatgcgcaacagagatcaccaccaaccaatcaccac 173
|||||||||||| |||||| ||||||| | |||||||||| || |||||||||| |
Sbjct: 217 cttttcaaagttcatatatggaaccattctcaacagagatatgcagaaaccaatcacaag 276
Query: 174 ctttcgtctccaatgtggctcttcgcatttcaacctttctgat 216
|||||||| |||||||| ||| |||||||||||||||||
Sbjct: 277 ttttcgtctacaatgtggtcattccaatttcaacctttctgat 319
>gnl|LJGI|TC64714 similar to UniRef100_Q2HUK1 Cluster: FBD; n=1; Medicago
truncatula|Rep: FBD - Medicago truncatula (Barrel
medic), partial (14%)
Length = 791
Score = 79.8 bits (40), Expect = 3e-14
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 829 ctttcttcacagcttaggaagtgttccattacaaattataaaggcacgaaaagtgagctg 888
||||| ||||||||||||| || ||||| ||||| | ||| || | |||||||||||
Sbjct: 353 ctttcgtcacagcttaggacatgcgacattataaattctgaagtcaaggaaagtgagctg 412
Query: 889 cattttgcaacatatattatgcagagttccagagttttac 928
|||||||||| |||||||||||||| ||| ||||||||||
Sbjct: 413 cattttgcaaaatatattatgcagaattcaagagttttac 452
Score = 58.0 bits (29), Expect = 1e-07
Identities = 88/107 (82%), Gaps = 3/107 (2%)
Strand = Plus / Plus
Query: 629 ttgacaagtacccttatgaaattccagtttttcccaatttaactcatctggagctcatga 688
|||||||||||| |||| |||||| |||||||||||||||||||| ||||| | |
Sbjct: 150 ttgacaagtacctggatgacattccactttttcccaatttaactcatgcggagc---tta 206
Query: 689 tgtcgggtattggtatgaactggcatttggtacttgcgatgctcaag 735
||| ||| ||| ||||| |||| ||||||||||||| || ||||||
Sbjct: 207 tgttgggatttgatatgagctgggatttggtacttgcaatactcaag 253
>gnl|LJGI|TC63810 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (18%)
Length = 750
Score = 69.9 bits (35), Expect = 3e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 218 tcaatagatgggtcaactctgcagtacaacgtggacttgagaatctctacatccagctg 276
|||||| |||||||||| ||||| || |||||||||||||||| |||||||||| ||||
Sbjct: 537 tcaatatatgggtcaacgctgcaataaaacgtggacttgagaacctctacatccggctg 595
Score = 67.9 bits (34), Expect = 1e-10
Identities = 81/96 (84%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 307 agctgcattttcagctgcaagactcttgttgttctcaagttgtttgggtt---aaacgtg 363
|||||||||||||||||||| ||||| |||||||| ||||| | || || | || ||
Sbjct: 620 agctgcattttcagctgcaaaactctggttgttcttgagttggtgggattagaagacctg 679
Query: 364 gatgtattttcttttgttcaccttccttcgctcaaa 399
|||||| ||||||||| |||||||||||| ||||||
Sbjct: 680 gatgtaatttcttttgctcaccttccttcactcaaa 715
>gnl|LJGI|TC74716 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (7%)
Length = 503
Score = 63.9 bits (32), Expect = 2e-09
Identities = 91/110 (82%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 819 tcctgagtgtctttcttcacagcttaggaagtgttccattacaaattataaaggcacgaa 878
|||||| || |||||||||||||||| || ||||| |||| |||||||||||| |
Sbjct: 10 tcctgaatgcctttcttcacagcttaagacgtgttttattatgaattataaaggcgc--- 66
Query: 879 aagtgagctgcattttgcaacatatattatgcagagttccagagttttac 928
|||||| |||||||||||| |||||||||| ||| ||| |||| |||||
Sbjct: 67 cagtgagttgcattttgcaaaatatattatggagaattcaagagctttac 116
>gnl|LJGI|FS329231 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
Medicago truncatula|Rep: Cyclin-like F-box; FBD -
Medicago truncatula (Barrel medic), partial (16%)
Length = 767
Score = 52.0 bits (26), Expect = 6e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 236 ctgcagtacaacgtggacttgagaatctctacatccagctgt 277
||||| ||| ||| || |||||||||||||||||||||||||
Sbjct: 598 ctgcaatacgacgcgggcttgagaatctctacatccagctgt 639
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 307 agctgcattttcagctgcaagactcttgttgttctcaa 344
|||||||||||| ||||||| ||||| |||||||||||
Sbjct: 663 agctgcattttctgctgcaatactctggttgttctcaa 700