Miyakogusa Predicted Gene
- Lj0g3v0272799.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0272799.3 Non Chatacterized Hit- tr|D7ML96|D7ML96_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,70.59,0.00000009,WRKY,DNA-binding WRKY; DNA binding
domain,DNA-binding WRKY; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAM,CUFF.18056.3
(528 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71912 similar to UniRef100_A7QQF6 Cluster: Chromosome... 607 e-173
gnl|LJGI|GO009116 similar to UniRef100_A7LHJ0 Cluster: WRKY59; n... 347 4e-95
gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; ... 113 1e-24
gnl|LJGI|TC61070 similar to UniRef100_Q40090 Cluster: SPF1 prote... 113 1e-24
gnl|LJGI|TC64700 similar to UniRef100_A7LHH5 Cluster: WRKY35; n=... 74 1e-12
gnl|LJGI|DC593983 similar to UniRef100_O81639 Cluster: Zinc fing... 66 2e-10
gnl|LJGI|TC79677 similar to UniRef100_A7LHF5 Cluster: WRKY5; n=1... 66 2e-10
>gnl|LJGI|TC71912 similar to UniRef100_A7QQF6 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (31%)
Length = 991
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 223 ggctcgtctactttttctaatgaagaagaagaagatgatcaaggcactcatggtagtgta 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggctcgtctactttttctaatgaagaagaagaagatgatcaaggcactcatggtagtgta 62
Query: 283 tctttaggttatgatggggaaggagatgaatcagagtctaaaagaaggaaacttgaatca 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tctttaggttatgatggggaaggagatgaatcagagtctaaaagaaggaaacttgaatca 122
Query: 343 tatgcaacagagttgagtggagctaccagagctattcgtgagcctagagttgttgtacag 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tatgcaacagagttgagtggagctaccagagctattcgtgagcctagagttgttgtacag 182
Query: 403 actactagcgaagtagatatcctcgatgatggttaccgatggcggaaatatgggcaaaaa 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 actactagcgaagtagatatcctcgatgatggttaccgatggcggaaatatgggcaaaaa 242
Query: 463 gttgtaaagggaaatcccaacccaaggagttactacaagtgcaccaacgctgggtgcatg 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gttgtaaagggaaatcccaacccaaggagttactacaagtgcaccaacgctgggtgcatg 302
Query: 523 gtgagg 528
||||||
Sbjct: 303 gtgagg 308
>gnl|LJGI|GO009116 similar to UniRef100_A7LHJ0 Cluster: WRKY59; n=1; Glycine max|Rep:
WRKY59 - Glycine max (Soybean), partial (58%)
Length = 750
Score = 347 bits (175), Expect = 4e-95
Identities = 213/219 (97%), Gaps = 5/219 (2%)
Strand = Plus / Plus
Query: 1 atgcaagtggacaatcctgaacatgttgagccacagcgtgtcggtgaaggtgacctgggc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 537 atgcaagtggacaatcctgaacatgttgcgccacagcgtgtcggtgaaggtgacctgggc 596
Query: 61 tgggctgatgcacaaaagggaaatattgctggagctggtaactggaagcaggacaacctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 597 tgggctgatgcacaaaagggaaatattgctggagctggtaactggaagca-gacaacctt 655
Query: 121 gaagtgacatcatcagcatctgttggccctgagtatggcaaccagtccaccaacttgcag 180
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 656 gaagtgacatcatcagcatctgttggccctgagtatggc-accagt-caccaacttgcag 713
Query: 181 actcaaaatggaactaacttagactcgggagaagcagtg 219
|||| |||||| |||||||||||||||||||||||||||
Sbjct: 714 actc-aaatgg-actaacttagactcgggagaagcagtg 750
>gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; n=1; Glycine
max|Rep: WRKY39 - Glycine max (Soybean), partial (62%)
Length = 1146
Score = 113 bits (57), Expect = 1e-24
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 418 gatatcctcgatgatggttaccgatggcggaaatatgggcaaaaagttgtaaagggaaat 477
|||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||||
Sbjct: 266 gatatcctagatgatggttacagatggaggaaatatgggcagaaagttgtaaagggaaat 325
Query: 478 cccaacccaaggagttactacaagtgcac 506
|| || |||||||||||||| || |||||
Sbjct: 326 ccaaatccaaggagttactataaatgcac 354
>gnl|LJGI|TC61070 similar to UniRef100_Q40090 Cluster: SPF1 protein; n=1; Ipomoea
batatas|Rep: SPF1 protein - Ipomoea batatas (Sweet
potato) (Batate), partial (41%)
Length = 1517
Score = 113 bits (57), Expect = 1e-24
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 418 gatatcctcgatgatggttaccgatggcggaaatatgggcaaaaagttgtaaagggaaat 477
||||| || |||||||| ||||||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 1236 gatattcttgatgatggataccgatggaggaaatatgggcagaaagtagtaaagggaaat 1295
Query: 478 cccaacccaaggagttactacaagtgcac 506
|| || |||||||||||||||||||||||
Sbjct: 1296 ccaaatccaaggagttactacaagtgcac 1324
>gnl|LJGI|TC64700 similar to UniRef100_A7LHH5 Cluster: WRKY35; n=1; Glycine max|Rep:
WRKY35 - Glycine max (Soybean), partial (53%)
Length = 888
Score = 73.8 bits (37), Expect = 1e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 427 gatgatggttaccgatggcggaaatatgggcaaaaagttgtaaagggaaatcccaaccca 486
|||||||| ||||| ||||| ||||||||||| || || || | ||||||||| ||||||
Sbjct: 12 gatgatgggtaccgctggcgtaaatatgggcagaaggtggtgaggggaaatccgaaccca 71
Query: 487 aggagttactacaagtgcaccaacgctgg 515
||||| || ||||||||||| || |||||
Sbjct: 72 aggagctattacaagtgcacaaatgctgg 100
>gnl|LJGI|DC593983 similar to UniRef100_O81639 Cluster: Zinc finger protein; n=1;
Pimpinella brachycarpa|Rep: Zinc finger protein -
Pimpinella brachycarpa, partial (26%)
Length = 587
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 448 aaatatgggcaaaaagttgtaaagggaaatcccaacccaaggagttactacaa 500
||||||||||| |||||||| |||||||| || ||||||||||| ||||||||
Sbjct: 524 aaatatgggcagaaagttgttaagggaaacccaaacccaaggagctactacaa 576
>gnl|LJGI|TC79677 similar to UniRef100_A7LHF5 Cluster: WRKY5; n=1; Glycine max|Rep:
WRKY5 - Glycine max (Soybean), partial (42%)
Length = 819
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 448 aaatatgggcaaaaagttgtaaagggaaatcccaacccaaggagttactacaa 500
||||||||||| |||||||| |||||||| || ||||||||||| ||||||||
Sbjct: 59 aaatatgggcagaaagttgttaagggaaacccaaacccaaggagctactacaa 111