Miyakogusa Predicted Gene

Lj0g3v0272749.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0272749.1 Non Chatacterized Hit- tr|I1JCF5|I1JCF5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21229
PE,85.02,0,HATPase_c,ATPase-like, ATP-binding domain; HisKA,Signal
transduction histidine kinase, subgroup 1, d,CUFF.18040.1
         (2103 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81868 similar to UniRef100_A7QDV4 Cluster: Chromosome...   101   2e-20

>gnl|LJGI|TC81868 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (4%)
          Length = 730

 Score =  101 bits (51), Expect = 2e-20
 Identities = 117/139 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1286 gatgtgtttgtattttgatattgacagatggagtatcaaaggaaatgaaactaagagcag 1345
            |||||||||| ||||||||||||||| |   ||| |||||||||||||| ||||||||| 
Sbjct: 592  gatgtgtttgcattttgatattgacaaacaaagtgtcaaaggaaatgaatctaagagcat 651

                                                                        
Query: 1346 aactgatcagtcacttggaagcaagaaggaaggcagaggcatctagcaactataaaagcc 1405
            || || | |||||  | ||||||||||||||||||||| |||| |||||||| ||||| |
Sbjct: 652  aattgttaagtcaactagaagcaagaaggaaggcagagtcatcaagcaactacaaaagtc 711

                               
Query: 1406 agtttcttgcaaatatgag 1424
            | || ||||| || |||||
Sbjct: 712  aattccttgccaacatgag 730