Miyakogusa Predicted Gene

Lj0g3v0272499.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0272499.1 Non Chatacterized Hit- tr|G7L2F2|G7L2F2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,43.1,0.00000000002,DUF295,Protein of unknown function
DUF295,gene.g21163.t1.1
         (399 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024501 similar to UniRef100_A2Q2D9 Cluster: Cyclin-li...   434   e-121

>gnl|LJGI|GO024501 similar to UniRef100_A2Q2D9 Cluster: Cyclin-like F-box; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box - Medicago
           truncatula (Barrel medic), partial (6%)
          Length = 723

 Score =  434 bits (219), Expect = e-121
 Identities = 357/402 (88%), Gaps = 12/402 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgagaagaatcttgccttctcaattcaacaactgcaaagatgatgggaatgtggtt 60
           |||||||||||||| ||||||||||||| ||| |||||| |||||| ||  ||||| | |
Sbjct: 200 atggtgagaagaattttgccttctcaatccaaaaactgcgaagatgttgataatgtcgct 259

                                                                       
Query: 61  ttcaacgtatataagttggaactagatgatgcccaaaatgggaaggttttgcaaatgctg 120
           |||||| |||||||||||||||||||||   |||||||||||||||||||||||||||||
Sbjct: 260 ttcaacttatataagttggaactagatg---cccaaaatgggaaggttttgcaaatgctg 316

                                                                       
Query: 121 aaactggagaatttgggagataatgttttgtttgtaggtgattacagtgattcaactgtt 180
           ||||||||| |||||||||| ||  ||||||||||| ||||| | ||||||||||||| |
Sbjct: 317 aaactggaggatttgggagacaacattttgtttgtaagtgatgatagtgattcaactgct 376

                                                                       
Query: 181 gcgtcgaatccctatttctctaattctctgcaaaaggactcaatttactacactaatgat 240
           | ||||  | |||||||||||||||  ||||||||||||||||||||||||||      |
Sbjct: 377 gtgtcgtcttcctatttctctaattgcctgcaaaaggactcaatttactacac------t 430

                                                                       
Query: 241 aatgatgttggctcaccaattcctccctctcatgacccacttgatttaagggtgtataat 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 431 aatgatgttggctcaccaattcctccctctcatgacccacttgatttaagagtctataat 490

                                                                       
Query: 301 gtaaaggagggaagagtttttcaaaattaccctttc---aatccttccttcacgcgtgtg 357
           ||||||||||||||  || ||||| |||||||||||   ||||||||||||| |||||||
Sbjct: 491 gtaaaggagggaaggtttattcaacattaccctttcaataatccttccttcatgcgtgtg 550

                                                     
Query: 358 tcaccttcattatggattctaccaccattccaatgggattga 399
           |||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 551 tcaccttcgttatggattctaccatcattccaatgggattga 592