Miyakogusa Predicted Gene

Lj0g3v0272119.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0272119.2 tr|Q84LM4|Q84LM4_ARATH Acylamino acid-releasing
enzyme OS=Arabidopsis thaliana GN=aare PE=2 SV=1,56.25,2e-18,no
description,NULL; ACYLAMINO-ACID-RELEASING ENZYME,NULL; PROTEASE
FAMILY S9B,C DIPEPTIDYL-PEPTIDAS,CUFF.18099.2
         (279 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW625931 weakly similar to UniRef100_A7NWZ0 Cluster: Ch...   161   3e-39
gnl|LJGI|FS328813 homologue to UniRef100_A1VDB8 Cluster: ABC tra...    56   1e-07
gnl|LJGI|BP084020                                                      56   1e-07
gnl|LJGI|TC65317                                                       54   5e-07

>gnl|LJGI|BW625931 weakly similar to UniRef100_A7NWZ0 Cluster: Chromosome chr5
           scaffold_2, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (19%)
          Length = 484

 Score =  161 bits (81), Expect = 3e-39
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttcagtgtaatgaagatctcagtcaaggatgcttctgaaagtacaacaaaaggtgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atgttcagtgtaatgaagatctcagtcaaggatgcttctgaaagtacaacaaaaggtgct 463

                                
Query: 61  agtaaaccttatgagtctata 81
           |||||||||||||||||||||
Sbjct: 464 agtaaaccttatgagtctata 484


>gnl|LJGI|FS328813 homologue to UniRef100_A1VDB8 Cluster: ABC transporter related
           precursor; n=1; Desulfovibrio vulgaris subsp. vulgaris
           DP4|Rep:, partial (1%)
          Length = 767

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 232 agagggtgcggtcatgatgtggatttttcctatatttgggcctgacaa 279
           ||||||||  |||||||  ||||||||||||| |||||||||||||||
Sbjct: 61  agagggtgaagtcatgacatggatttttcctaaatttgggcctgacaa 108


>gnl|LJGI|BP084020 
          Length = 337

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 232 agagggtgcggtcatgatgtggatttttcctatatttgggcctgacaa 279
           |||||| | ||||||||| ||||  |||||||||||||||||||||||
Sbjct: 53  agagggggtggtcatgatatggacctttcctatatttgggcctgacaa 100


>gnl|LJGI|TC65317 
          Length = 654

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 241 ggtcatgatgtggatttttcctatatttgggcctgacaa 279
           ||||||||| |||| |||||||| |||||||||||||||
Sbjct: 579 ggtcatgatatggacttttcctacatttgggcctgacaa 541