Miyakogusa Predicted Gene
- Lj0g3v0271999.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0271999.1 tr|Q6T804|Q6T804_ORYSJ ANTHER INDEHISCENCE1
OS=Oryza sativa subsp. japonica GN=AID1 PE=2
SV=1,32.49,2e-18,Myb_DNA-binding,SANT/Myb domain; HTH_MYB,Myb domain;
Homeodomain-like,Homeodomain-like; SANT SWI3, ,CUFF.17984.1
(2010 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67388 weakly similar to UniRef100_A9SB35 Cluster: Pre... 2859 0.0
gnl|LJGI|FS356462 839 0.0
gnl|LJGI|TC76155 similar to UniRef100_A7UQU9 Cluster: Homeodomai... 200 2e-50
>gnl|LJGI|TC67388 weakly similar to UniRef100_A9SB35 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(13%)
Length = 1529
Score = 2859 bits (1442), Expect = 0.0
Identities = 1501/1529 (98%)
Strand = Plus / Plus
Query: 13 atgtccgggtgggtcattgagtttctcctccggagctccgtacccgattccaccatccag 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtccgggtgggtcattgagtttctcctccggagctccgtacccgattccaccatccag 60
Query: 73 aaaaccctcgccgccctcccactctccggcgccgatccccgcctcaagaaaaccctcctc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaccctcgccgccctcccactctccggcgccgatccccgcctcaagaaaaccctcctc 120
Query: 133 ctccgcaccctccattcccacctcatcaacgcttccctctccgaaaccgccctcgagatt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccgcaccctccattcccacctcatcaacgcttccctctccgaaaccgccctcgagatt 180
Query: 193 ctcgaactcctcgaacaactccacctcaacgacgccgtacccgtcccggactccttgcgc 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgaactcctcgaacaactccacctcaacgacgccgtacccgtcccggactccttgcgc 240
Query: 253 cgcgcctactgccccgtcgccgttgagtgcaccgttaagtgcctcgccgcctcccccgat 312
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 cgcgcctactgcgccgtcgccgttgagtgcaccgttaagtacctcgccgcctcccccgat 300
Query: 313 gacccctccggcgagtacttctccgccgtccgccggatctggcgcggccgtgttgctgca 372
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 gacccctccggcgagtacttctccaccgtccgccggatctggcgcggccgtgttgctgca 360
Query: 373 ttgtcggaggcaggtcgcgctagcgggctggtctccgatgatttggagcggtggagggat 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgtcggaggcaggtcgcgctagcgggctggtctccgatgatttggagcggtggagggat 420
Query: 433 gatgtcgaggccgcgctgtgggatcctagggtttctgagaggattgcggggctgaacacg 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgtcgaggccgcgctgtgggatcctagggtttctgagaggattgcggggctgaacacg 480
Query: 493 aggtgggtcgcgatggttgaggtcagggggtacctgaaggaagcatgggagatcatgggt 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggtgggtcgcgatggttgaggtcagggggtacctgaaggaagcatgggagatcatgggt 540
Query: 553 gcttcgtttctcgacttgatggcgacggggtcgaaggggaagggtttgtgccttggaggt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcttcgtttctcgacttgatggcgacggggtcgaaggggaagggtttgtgccttggaggt 600
Query: 613 gtttgtgaaaatgattctgtgagaaagcgtggtgatggtgggttagagtgttcggcgaag 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtttgtgaaaatgattctgtgagaaagcgtggtgatggtgggttagagtgttcggcgaag 660
Query: 673 cgtgctgatagccttgaaggtgtttgtgaaaatgattctgtgaggaagtgtggtgatgga 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgtgctgatagccttgaaggtgtttgtgaaaatgattctgtgaggaagtgtggtgatgga 720
Query: 733 gggatagagtgttccgcgaagcgtgctaataggaatgaaatcgatgataatgatggtttg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggatagagtgttccgcgaagcgtgctaataggaatgaaatcgatgataatgatggtttg 780
Query: 793 tgccttgatggtgtttgtgaaaatgattctgtgaggaagcgtggtggtggtgggttagaa 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgccttgatggtgtttgtgaaaatgattctgtgaggaagcgtggtggtggtgggttagaa 840
Query: 853 tgttctgcgaagtgtgctgataggaatgaagtcgatgataatgagggtttgcgccttgaa 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgttctgcgaagtgtgctgataggaatgaagtcgatgataatgagggtttgcgccttgaa 900
Query: 913 ggtgcttgtgaaaatgattctgtgaggaagcatggtgatggagggttagagtgttcgggg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggtgcttgtgaaaatgattctgtgaggaagcatggtgatggagggttagagtgttcgggg 960
Query: 973 aagcgggctgatatgaatgaatttgatgataatgagggtttgcaccttgaaggtgtttgt 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aagcgggctgatatgaatgaatttgatgataatgagggtttgcaccttgaaggtgtttgt 1020
Query: 1033 gaaaatgattctgtgaggaannnnnnnnnnnnnnnnnngttagaatgttcggcgaagcgg 1092
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1021 gaaaatgattctgtgaggaagtgtggtggtggtggtgggttagaatgttcggcgaagcgg 1080
Query: 1093 gctgataggagtgaattcgatgataatgagggtttgtgccttgaaggtgtttgtgaaaat 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gctgataggagtgaattcgatgataatgagggtttgtgccttgaaggtgtttgtgaaaat 1140
Query: 1153 gattctgtgaggaagcatggtgatggagggttagagtgttcggcgaagcgtgctgatagg 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gattctgtgaggaagcatggtgatggagggttagagtgttcggcgaagcgtgctgatagg 1200
Query: 1213 aatgaagtcgatggtaatgatgacaatggcactgatgatggtgcatgccgcatggagggt 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aatgaagtcgatggtaatgatgacaatggcactgatgatggtgcatgccgcatggagggt 1260
Query: 1273 gtgaccgtgacagaggaaaaccagggcaaggagcaatttgaagacacagttgatgttcct 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtgaccgtgacagaggaaaaccagggcaaggagcaatttgaagacacagttgatgttcct 1320
Query: 1333 gcaaagggaaatcaagttcagaaagaaaacattcagctcaaacgcaagcagtttgtactt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gcaaagggaaatcaagttcagaaagaaaacattcagctcaaacgcaagcagtttgtactt 1380
Query: 1393 caaaaatgccataggggagttcaaatctctggtgctgaggaagtggtaccnnnnnnntcg 1452
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1381 caaaaatgccataggggagttcaaatctctggtgctgaggaagtggtaccaaaaaaatcg 1440
Query: 1453 cgtagcaactgtgaccccttgcctagtgctgaagttaaaaaagttcgagaatcccttaga 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cgtagcaactgtgaccccttgcctagtgctgaagttaaaaaagttcgagaatcccttaga 1500
Query: 1513 tcaagttctttggagctacaagcagtggt 1541
|||||||||||||||||||||||||||||
Sbjct: 1501 tcaagttctttggagctacaagcagtggt 1529
>gnl|LJGI|FS356462
Length = 657
Score = 839 bits (423), Expect = 0.0
Identities = 459/477 (96%)
Strand = Plus / Minus
Query: 872 ataggaatgaagtcgatgataatgagggtttgcgccttgaaggtgcttgtgaaaatgatt 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ataggaatgaagtcgatgataatgagggtttgcgccttgaaggtgcttgtgaaaatgatt 598
Query: 932 ctgtgaggaagcatggtgatggagggttagagtgttcggggaagcgggctgatatgaatg 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ctgtgaggaagcatggtgatggagggttagagtgttcggggaagcgggctgatatgaatg 538
Query: 992 aatttgatgataatgagggtttgcaccttgaaggtgtttgtgaaaatgattctgtgagga 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aatttgatgataatgagggtttgcaccttgaaggtgtttgtgaaaatgattctgtgagga 478
Query: 1052 annnnnnnnnnnnnnnnnngttagaatgttcggcgaagcgggctgataggagtgaattcg 1111
| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agtgtggtggtggtggtgggttagaatgttcggcgaagcgggctgataggagtgaattcg 418
Query: 1112 atgataatgagggtttgtgccttgaaggtgtttgtgaaaatgattctgtgaggaagcatg 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atgataatgagggtttgtgccttgaaggtgtttgtgaaaatgattctgtgaggaagcatg 358
Query: 1172 gtgatggagggttagagtgttcggcgaagcgtgctgataggaatgaagtcgatggtaatg 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtgatggagggttagagtgttcggcgaagcgtgctgataggaatgaagtcgatggtaatg 298
Query: 1232 atgacaatggcactgatgatggtgcatgccgcatggagggtgtgaccgtgacagaggaaa 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgacaatggcactgatgatggtgcatgccgcatggagggtgtgaccgtgacagaggaaa 238
Query: 1292 accagggcaaggagcaatttgaagacacagttgatgttcctgcaaagggaaatcaag 1348
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 accagggcaaggagcaatttgaagacacagttgatgttcctgcaaagggaaatcaag 181
Score = 392 bits (198), Expect = e-108
Identities = 296/328 (90%), Gaps = 3/328 (0%)
Strand = Plus / Minus
Query: 683 gccttgaaggtgtttgtgaaaatgattctgtgaggaagtgtggtgatggagggatagagt 742
|||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 624 gccttgaaggtgcttgtgaaaatgattctgtgaggaagcatggtgatggagggttagagt 565
Query: 743 gttccgcgaagcgtgctaataggaatgaaatcgatgataatgatggtttgtgccttgatg 802
|||| | |||||| ||| ||| ||||||| | ||||||||||| |||||| |||||| |
Sbjct: 564 gttcggggaagcgggctgatatgaatgaatttgatgataatgagggtttgcaccttgaag 505
Query: 803 gtgtttgtgaaaatgattctgtgaggaagcgtggtggtggtgg---gttagaatgttctg 859
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |
Sbjct: 504 gtgtttgtgaaaatgattctgtgaggaagtgtggtggtggtggtgggttagaatgttcgg 445
Query: 860 cgaagtgtgctgataggaatgaagtcgatgataatgagggtttgcgccttgaaggtgctt 919
||||| | |||||||||| |||| |||||||||||||||||||| |||||||||||| ||
Sbjct: 444 cgaagcgggctgataggagtgaattcgatgataatgagggtttgtgccttgaaggtgttt 385
Query: 920 gtgaaaatgattctgtgaggaagcatggtgatggagggttagagtgttcggggaagcggg 979
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 384 gtgaaaatgattctgtgaggaagcatggtgatggagggttagagtgttcggcgaagcgtg 325
Query: 980 ctgatatgaatgaatttgatgataatga 1007
|||||| ||||||| | |||| ||||||
Sbjct: 324 ctgataggaatgaagtcgatggtaatga 297
Score = 327 bits (165), Expect = 2e-88
Identities = 263/295 (89%), Gaps = 3/295 (1%)
Strand = Plus / Minus
Query: 761 ataggaatgaaatcgatgataatgatggtttgtgccttgatggtgtttgtgaaaatgatt 820
||||||||||| ||||||||||||| |||||| ||||||| |||| ||||||||||||||
Sbjct: 657 ataggaatgaagtcgatgataatgagggtttgcgccttgaaggtgcttgtgaaaatgatt 598
Query: 821 ctgtgaggaagcgtggtggtggtgggttagaatgttctgcgaagtgtgctgataggaatg 880
|||||||||||| ||||| ||| |||||||| ||||| | |||| | ||||||| |||||
Sbjct: 597 ctgtgaggaagcatggtgatggagggttagagtgttcggggaagcgggctgatatgaatg 538
Query: 881 aagtcgatgataatgagggtttgcgccttgaaggtgcttgtgaaaatgattctgtgagga 940
|| | ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 537 aatttgatgataatgagggtttgcaccttgaaggtgtttgtgaaaatgattctgtgagga 478
Query: 941 ag---catggtgatggagggttagagtgttcggggaagcgggctgatatgaatgaatttg 997
|| ||||| ||| |||||||| ||||||| |||||||||||||| || |||||| |
Sbjct: 477 agtgtggtggtggtggtgggttagaatgttcggcgaagcgggctgataggagtgaattcg 418
Query: 998 atgataatgagggtttgcaccttgaaggtgtttgtgaaaatgattctgtgaggaa 1052
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 417 atgataatgagggtttgtgccttgaaggtgtttgtgaaaatgattctgtgaggaa 363
Score = 153 bits (77), Expect = 5e-36
Identities = 98/105 (93%)
Strand = Plus / Minus
Query: 683 gccttgaaggtgtttgtgaaaatgattctgtgaggaagtgtggtgatggagggatagagt 742
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 399 gccttgaaggtgtttgtgaaaatgattctgtgaggaagcatggtgatggagggttagagt 340
Query: 743 gttccgcgaagcgtgctaataggaatgaaatcgatgataatgatg 787
|||| |||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 339 gttcggcgaagcgtgctgataggaatgaagtcgatggtaatgatg 295
Score = 149 bits (75), Expect = 8e-35
Identities = 87/91 (95%)
Strand = Plus / Minus
Query: 593 agggtttgtgccttggaggtgtttgtgaaaatgattctgtgagaaagcgtggtgatggtg 652
||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| |
Sbjct: 408 agggtttgtgccttgaaggtgtttgtgaaaatgattctgtgaggaagcatggtgatggag 349
Query: 653 ggttagagtgttcggcgaagcgtgctgatag 683
|||||||||||||||||||||||||||||||
Sbjct: 348 ggttagagtgttcggcgaagcgtgctgatag 318
Score = 115 bits (58), Expect = 1e-24
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 593 agggtttgtgccttggaggtgtttgtgaaaatgattctgtgagaaagcgtggtgatggtg 652
|||||||| |||||| ||||| ||||||||||||||||||||| |||| ||||||||| |
Sbjct: 633 agggtttgcgccttgaaggtgcttgtgaaaatgattctgtgaggaagcatggtgatggag 574
Query: 653 ggttagagtgttcggcgaagcgtgctgata 682
||||||||||||||| |||||| |||||||
Sbjct: 573 ggttagagtgttcggggaagcgggctgata 544
Score = 95.6 bits (48), Expect = 1e-18
Identities = 83/94 (88%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 593 agggtttgtgccttggaggtgtttgtgaaaatgattctgtgagaaag---cgtggtgatg 649
|||||||| ||||| ||||||||||||||||||||||||||| ||| |||||| ||
Sbjct: 522 agggtttgcaccttgaaggtgtttgtgaaaatgattctgtgaggaagtgtggtggtggtg 463
Query: 650 gtgggttagagtgttcggcgaagcgtgctgatag 683
|||||||||| |||||||||||||| ||||||||
Sbjct: 462 gtgggttagaatgttcggcgaagcgggctgatag 429
>gnl|LJGI|TC76155 similar to UniRef100_A7UQU9 Cluster: Homeodomain-like; n=1; Medicago
truncatula|Rep: Homeodomain-like - Medicago truncatula
(Barrel medic), partial (12%)
Length = 441
Score = 200 bits (101), Expect = 2e-50
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1910 gaggaaactggaaagcaatccgagatttttacagtaacatatttgaaaatagaagcgcag 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gaggaaactggaaagcaatccgagatttttacagtaacatatttgaaaatagaagcgcag 243
Query: 1970 ttgatctcaaggacaagtggcgaaacatgctacgctgacac 2010
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttgatctcaaggacaagtggcgaaacatgctacgctgacac 284