Miyakogusa Predicted Gene
- Lj0g3v0271919.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0271919.1 gi|1370187|emb|Z73943.1|.path1.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60471 UniRef100_Q40214 Cluster: RAB7D; n=1; Lotus jap... 1237 0.0
gnl|LJGI|TC72005 UniRef100_Q40214 Cluster: RAB7D; n=1; Lotus jap... 482 e-135
gnl|LJGI|TC61047 UniRef100_Q40213 Cluster: RAB7C; n=1; Lotus jap... 184 4e-46
gnl|LJGI|BP035314 homologue to UniRef100_Q40214 Cluster: RAB7D; ... 143 1e-33
gnl|LJGI|GO023826 UniRef100_Q40213 Cluster: RAB7C; n=1; Lotus ja... 129 2e-29
gnl|LJGI|FS358153 similar to UniRef100_Q43463 Cluster: Ras-relat... 94 1e-18
gnl|LJGI|NP459472 GB|Z73940.1|CAA98168.1 RAB7A [Lotus japonicus] 94 1e-18
gnl|LJGI|TC57237 UniRef100_Q40212 Cluster: RAB7B; n=1; Lotus jap... 90 2e-17
>gnl|LJGI|TC60471 UniRef100_Q40214 Cluster: RAB7D; n=1; Lotus japonicus|Rep: RAB7D -
Lotus japonicus, complete
Length = 1103
Score = 1237 bits (624), Expect = 0.0
Identities = 624/624 (100%)
Strand = Plus / Plus
Query: 1 atggcatctcgccgccgcatgttactcaaggtcataatcctcggagatagcggggttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcatctcgccgccgcatgttactcaaggtcataatcctcggagatagcggggttggt 204
Query: 61 aaaacatccttgatgaatcagtatgtgaatcgtaagtttagtaatcagtataaggctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaaacatccttgatgaatcagtatgtgaatcgtaagtttagtaatcagtataaggctaca 264
Query: 121 attggtgcggattttcttaccaaggaagttcaatttgaagataggttgttcacattgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attggtgcggattttcttaccaaggaagttcaatttgaagataggttgttcacattgcag 324
Query: 181 atttgggatactgctggtcaagaacggtttcagtctcttggtgtggctttctatcggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttgggatactgctggtcaagaacggtttcagtctcttggtgtggctttctatcggggt 384
Query: 241 gcggactgctgtgtccttgtttatgatgtaaatgtcatgaaatcttttgacaacctcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcggactgctgtgtccttgtttatgatgtaaatgtcatgaaatcttttgacaacctcaac 444
Query: 301 cattggcgagaagaatttcttatccaggctagtccatctgaccctgaaaacttcccattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattggcgagaagaatttcttatccaggctagtccatctgaccctgaaaacttcccattt 504
Query: 361 gttgtcttgggaaacaaaatagatgttgatggtgggaatagccgagttatttctgagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgtcttgggaaacaaaatagatgttgatggtgggaatagccgagttatttctgagaag 564
Query: 421 aaagcaaaggcatggtgtgcttcaaagggaaacataccatacttcgagacctctgcaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaagcaaaggcatggtgtgcttcaaagggaaacataccatacttcgagacctctgcaaaa 624
Query: 481 gaaggattcaatgttgaagctgctttccaatgtatagcaaaaaatgcactcaagaatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaggattcaatgttgaagctgctttccaatgtatagcaaaaaatgcactcaagaatgaa 684
Query: 541 ccagaagaagaaatgtatcttcctgacacaatcgatgtcggtggtggtggacgacagcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccagaagaagaaatgtatcttcctgacacaatcgatgtcggtggtggtggacgacagcaa 744
Query: 601 agatctacaggctgtgaatgttaa 624
||||||||||||||||||||||||
Sbjct: 745 agatctacaggctgtgaatgttaa 768
>gnl|LJGI|TC72005 UniRef100_Q40214 Cluster: RAB7D; n=1; Lotus japonicus|Rep: RAB7D -
Lotus japonicus, partial (39%)
Length = 677
Score = 482 bits (243), Expect = e-135
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 382 gatgttgatggtgggaatagccgagttatttctgagaagaaagcaaaggcatggtgtgct 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgttgatggtgggaatagccgagttatttctgagaagaaagcaaaggcatggtgtgct 60
Query: 442 tcaaagggaaacataccatacttcgagacctctgcaaaagaaggattcaatgttgaagct 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaagggaaacataccatacttcgagacctctgcaaaagaaggattcaatgttgaagct 120
Query: 502 gctttccaatgtatagcaaaaaatgcactcaagaatgaaccagaagaagaaatgtatctt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctttccaatgtatagcaaaaaatgcactcaagaatgaaccagaagaagaaatgtatctt 180
Query: 562 cctgacacaatcgatgtcggtggtggtggacgacagcaaagatctacaggctgtgaatgt 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctgacacaatcgatgtcggtggtggtggacgacagcaaagatctacaggctgtgaatgt 240
Query: 622 taa 624
|||
Sbjct: 241 taa 243
>gnl|LJGI|TC61047 UniRef100_Q40213 Cluster: RAB7C; n=1; Lotus japonicus|Rep: RAB7C -
Lotus japonicus, complete
Length = 1090
Score = 184 bits (93), Expect = 4e-46
Identities = 396/497 (79%)
Strand = Plus / Plus
Query: 31 gtcataatcctcggagatagcggggttggtaaaacatccttgatgaatcagtatgtgaat 90
||||| || ||||| || ||||||||||| || || || |||||||| || |||||||||
Sbjct: 197 gtcatcattctcggtgacagcggggttgggaagacttctttgatgaaccaatatgtgaat 256
Query: 91 cgtaagtttagtaatcagtataaggctacaattggtgcggattttcttaccaaggaagtt 150
| |||||||| |||||||| |||||||| ||||| || ||||| | ||||| |||||
Sbjct: 257 aggaagtttagcaatcagtacaaggctaccattggagccgatttcttaaccaaagaagtg 316
Query: 151 caatttgaagataggttgttcacattgcagatttgggatactgctggtcaagaacggttt 210
|| |||||||||||| | ||||| ||||||||||||||||| ||||| || ||| | ||
Sbjct: 317 cagtttgaagataggcttttcaccttgcagatttgggatacagctggccaggaaagattc 376
Query: 211 cagtctcttggtgtggctttctatcggggtgcggactgctgtgtccttgtttatgatgta 270
|| || || || ||||||||||| ||||| || |||||||| ||||| ||||||||
Sbjct: 377 caaagcctaggagttgctttctatcgtggtgctgattgctgtgttcttgtatatgatgtt 436
Query: 271 aatgtcatgaaatcttttgacaacctcaaccattggcgagaagaatttcttatccaggct 330
||| |||||||| ||||||||||| ||| | ||| | ||||||||||| || || |||
Sbjct: 437 aattcaatgaaatcatttgacaaccttaacaactggagggaagaatttctcattcaagct 496
Query: 331 agtccatctgaccctgaaaacttcccatttgttgtcttgggaaacaaaatagatgttgat 390
||||| || || || || || || || |||||||| | |||||||| |||||| |||||
Sbjct: 497 agtccttccgatccagagaattttccttttgttgttataggaaacaagatagatattgat 556
Query: 391 ggtgggaatagccgagttatttctgagaagaaagcaaaggcatggtgtgcttcaaaggga 450
|||||||| || |||| |||| || ||||| || || |||||||| ||||| |||
Sbjct: 557 ggtgggaacagtagagtggtttcagaaaagaaggctcgtgcttggtgtgcatcaaaagga 616
Query: 451 aacataccatacttcgagacctctgcaaaagaaggattcaatgttgaagctgctttccaa 510
|| || || || || ||||| ||||| |||||||| | |||||||||| || ||||||
Sbjct: 617 aatatcccttattttgagacatctgccaaagaaggtattaatgttgaagaagcattccaa 676
Query: 511 tgtatagcaaaaaatgc 527
|| ||||| || |||||
Sbjct: 677 tgcatagcgaagaatgc 693
>gnl|LJGI|BP035314 homologue to UniRef100_Q40214 Cluster: RAB7D; n=1; Lotus
japonicus|Rep: RAB7D - Lotus japonicus, partial (23%)
Length = 580
Score = 143 bits (72), Expect = 1e-33
Identities = 78/80 (97%)
Strand = Plus / Minus
Query: 477 aaaagaaggattcaatgttgaagctgctttccaatgtatagcaaaaaatgcactcaagaa 536
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 580 aaaagaaggattcaatgttgaagctgctttccgatgtatagcgaaaaatgcactcaagaa 521
Query: 537 tgaaccagaagaagaaatgt 556
||||||||||||||||||||
Sbjct: 520 tgaaccagaagaagaaatgt 501
Score = 133 bits (67), Expect = 1e-30
Identities = 69/70 (98%)
Strand = Plus / Minus
Query: 555 gtatcttcctgacacaatcgatgtcggtggtggtggacgacagcaaagatctacaggctg 614
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gtatcttcctgacacnatcgatgtcggtggtggtggacgacagcaaagatctacaggctg 297
Query: 615 tgaatgttaa 624
||||||||||
Sbjct: 296 tgaatgttaa 287
>gnl|LJGI|GO023826 UniRef100_Q40213 Cluster: RAB7C; n=1; Lotus japonicus|Rep: RAB7C -
Lotus japonicus, partial (76%)
Length = 623
Score = 129 bits (65), Expect = 2e-29
Identities = 308/389 (79%)
Strand = Plus / Plus
Query: 139 accaaggaagttcaatttgaagataggttgttcacattgcagatttgggatactgctggt 198
||||| ||||| || |||||||||||| | ||||| ||||||||||||||||| |||||
Sbjct: 3 accaaagaagtgcagtttgaagataggcttttcaccttgcagatttgggatacagctggc 62
Query: 199 caagaacggtttcagtctcttggtgtggctttctatcggggtgcggactgctgtgtcctt 258
|| ||| | || || || || || ||||||||||| ||||| || |||||||| |||
Sbjct: 63 caggaaagattccaaagcctaggagttgctttctatcgtggtgctgattgctgtgttctt 122
Query: 259 gtttatgatgtaaatgtcatgaaatcttttgacaacctcaaccattggcgagaagaattt 318
|| |||||||| ||| |||||||| ||||||||||| ||| | ||| | |||||||||
Sbjct: 123 gtatatgatgttaattcaatgaaatcatttgacaaccttaacaactggagggaagaattt 182
Query: 319 cttatccaggctagtccatctgaccctgaaaacttcccatttgttgtcttgggaaacaaa 378
|| || || |||||||| || || || || || || || |||||||| | ||||||||
Sbjct: 183 ctcattcaagctagtccttccgatccagagaattttccttttgttgttataggaaacaag 242
Query: 379 atagatgttgatggtgggaatagccgagttatttctgagaagaaagcaaaggcatggtgt 438
|||||| ||||||||||||| || |||| |||| || ||||| || || ||||||
Sbjct: 243 atagatattgatggtgggaacagtagagtggtttcagaaaagaaggctcgtgcttggtgt 302
Query: 439 gcttcaaagggaaacataccatacttcgagacctctgcaaaagaaggattcaatgttgaa 498
|| ||||| ||||| || || || || ||||| ||||| |||||||| | |||||||||
Sbjct: 303 gcatcaaaaggaaatatcccttattttgagacatctgccaaagaaggtattaatgttgaa 362
Query: 499 gctgctttccaatgtatagcaaaaaatgc 527
| || |||||||| ||||| || |||||
Sbjct: 363 gaagcattccaatgcatagcgaagaatgc 391
>gnl|LJGI|FS358153 similar to UniRef100_Q43463 Cluster: Ras-related protein Rab7; n=1;
Glycine max|Rep: Ras-related protein Rab7 - Glycine max
(Soybean), partial (70%)
Length = 593
Score = 93.7 bits (47), Expect = 1e-18
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 415 gagaagaaagcaaaggcatggtgtgcttcaaagggaaacataccatacttcgagacctct 474
||||||||||| | || |||||||||||| | |||||||||||||||||| |||||||||
Sbjct: 362 gagaagaaagctagggaatggtgtgcttccaggggaaacataccatactttgagacctct 303
Query: 475 gcaaaagaaggattcaatgttga 497
|||||||| || | |||||||||
Sbjct: 302 gcaaaagagggttacaatgttga 280
>gnl|LJGI|NP459472 GB|Z73940.1|CAA98168.1 RAB7A [Lotus japonicus]
Length = 930
Score = 93.7 bits (47), Expect = 1e-18
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 370 ggaaacaaaatagatgttgatggtgggaatagccgagttatttctgagaagaaagcaaag 429
||||||||||| ||| ||||||| |||||||| |||| |||||||||||||||||||
Sbjct: 405 ggaaacaaaattgatattgatggcgggaatagtagagtggtttctgagaagaaagcaaaa 464
Query: 430 gcatggtgtgcttcaaagggaaacataccatacttcgagacctctgcaaaagaaggattc 489
| |||||||||||||| || || || || ||||| ||||| ||||||||||| | | |
Sbjct: 465 gactggtgtgcttcaaaagggaatattccctactttgagacatctgcaaaagaggactac 524
Query: 490 aatgttgaagctgctttcc 508
|||||||| ||||| ||||
Sbjct: 525 aatgttgatgctgcattcc 543
Score = 61.9 bits (31), Expect = 4e-09
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 25 ctcaaggtcataatcctcggagatagcggggttggtaaaacatccttgatgaatcagtat 84
||||||||||| | ||||| || ||||||||||| || || || ||||||||||| |||
Sbjct: 60 ctcaaggtcatcgttctcggcgacagcggggttggaaagacctcgttgatgaatcaatat 119
Query: 85 gtgaatcgtaagtttagtaatcagtataaggctacaattggtgcggatttt 135
||| || ||||||||| | || ||||| || ||||||||||| ||||||
Sbjct: 120 gtgcataagaagtttagtcagcaatataaagccacaattggtgctgatttt 170
>gnl|LJGI|TC57237 UniRef100_Q40212 Cluster: RAB7B; n=1; Lotus japonicus|Rep: RAB7B -
Lotus japonicus, complete
Length = 1005
Score = 89.7 bits (45), Expect = 2e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 370 ggaaacaaaatagatgttgatggtgggaatagccgagttatttctgagaagaaagcaaag 429
|||||||| || ||| |||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 504 ggaaacaagattgatattgatggtgggaatagtcgagtggtctctgagaagaaagcaaat 563
Query: 430 gcatggtgtgcttcaaagggaaacataccatacttcgagacctctgcaaaaga 482
| ||||||| |||||| || || || || ||||||||||| |||||||||||
Sbjct: 564 gactggtgtgtttcaaaagggaatatcccctacttcgagacatctgcaaaaga 616
Score = 77.8 bits (39), Expect = 7e-14
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 25 ctcaaggtcataatcctcggagatagcggggttggtaaaacatccttgatgaatcagtat 84
||||||||||| ||||||| ||||||||||| || || || || ||||||||||| |||
Sbjct: 159 ctcaaggtcattgtcctcggcgatagcggggtgggaaagacctcgttgatgaatcaatat 218
Query: 85 gtgaatcgtaagtttagtaatcagtataaggctacaattggtgcggatttt 135
||| | | ||||||| | || |||||||||||||||||||||||||||
Sbjct: 219 gtgcacaagaggtttagtcagcaatataaggctacaattggtgcggatttt 269