Miyakogusa Predicted Gene

Lj0g3v0271889.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0271889.1 tr|A9SGP8|A9SGP8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_164794,37.65,0.000000000000003,seg,NULL,CUFF.17978.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57535 similar to UniRef100_A7QF18 Cluster: Chromosome...   821   0.0  
gnl|LJGI|TC60756 similar to UniRef100_A7QF18 Cluster: Chromosome...    64   7e-10

>gnl|LJGI|TC57535 similar to UniRef100_A7QF18 Cluster: Chromosome chr16 scaffold_86,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr16 scaffold_86, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (31%)
          Length = 1753

 Score =  821 bits (414), Expect = 0.0
 Identities = 414/414 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggccgagctgttggaagcgctgtgtcattctcaaacaagagcaagagaagctgagaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 atggccgagctgttggaagcgctgtgtcattctcaaacaagagcaagagaagctgagaaa 1121

                                                                        
Query: 61   gcagcacaacaagcttacaacgagaaggagcatatcctgagccttttcttcagacaggct 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gcagcacaacaagcttacaacgagaaggagcatatcctgagccttttcttcagacaggct 1181

                                                                        
Query: 121  tcacaactctttgcttacaagcagtggttccacctgctgcagctcgaaaatctctgcctt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 tcacaactctttgcttacaagcagtggttccacctgctgcagctcgaaaatctctgcctt 1241

                                                                        
Query: 181  caactcagaaacaaaaaccagccactgctaagtctcttcccatcggctttacaccgggtc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 caactcagaaacaaaaaccagccactgctaagtctcttcccatcggctttacaccgggtc 1301

                                                                        
Query: 241  ccttcgaggggaacgctgcataagaagagtcctggaaaaggtggaaagaggaagaattgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 ccttcgaggggaacgctgcataagaagagtcctggaaaaggtggaaagaggaagaattgt 1361

                                                                        
Query: 301  aacagaagatgtgggatccaaaactgcattgtcgctttcgcggtgggtttaggccttgct 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 aacagaagatgtgggatccaaaactgcattgtcgctttcgcggtgggtttaggccttgct 1421

                                                                  
Query: 361  ggtgctggtttgcttcttggttggaccttggggtggatgtttcctacactgtaa 414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 ggtgctggtttgcttcttggttggaccttggggtggatgtttcctacactgtaa 1475


>gnl|LJGI|TC60756 similar to UniRef100_A7QF18 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 977

 Score = 63.9 bits (32), Expect = 7e-10
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 114 acaggcttcacaactctttgcttacaagcagtggttccacctgctgcagctcgaaaatct 173
           ||||||||||||||| ||||| || ||||| ||||| || ||||||||||| |||| |||
Sbjct: 449 acaggcttcacaactttttgcatataagcaatggtttcaactgctgcagctggaaactct 508

               
Query: 174 ctgc 177
           ||||
Sbjct: 509 ctgc 512