Miyakogusa Predicted Gene
- Lj0g3v0271729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0271729.1 tr|Q6H525|Q6H525_ORYSJ Os02g0230300 protein
OS=Oryza sativa subsp. japonica GN=OSJNBb0035N08.30
PE=4,40.51,9e-19,seg,NULL,CUFF.17992.1
(1035 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75755 similar to UniRef100_Q1U817 Cluster: Surface pr... 789 0.0
gnl|LJGI|TC69203 498 e-140
gnl|LJGI|AV407566 weakly similar to UniRef100_A7PJX8 Cluster: Ch... 460 e-129
gnl|LJGI|TC65717 similar to UniRef100_A7RPE6 Cluster: Predicted ... 212 3e-54
gnl|LJGI|TC79544 60 3e-08
>gnl|LJGI|TC75755 similar to UniRef100_Q1U817 Cluster: Surface protein from
Gram-positive cocci, anchor region; n=1; Lactobacillus
reuteri 100-23|Rep: Surface protein from Gram-positive
cocci, anchor region - Lactobacillus reuteri 100-23,
partial (4%)
Length = 472
Score = 789 bits (398), Expect = 0.0
Identities = 398/398 (100%)
Strand = Plus / Plus
Query: 113 ctctcaaccctcttctctgttctatctcttggtgttcttcccagaagctagacacaatgc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctcaaccctcttctctgttctatctcttggtgttcttcccagaagctagacacaatgc 60
Query: 173 agagcaaaagaagccatgtctctcttaccatgcttgcacttcttgttgtgttgctttctc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagcaaaagaagccatgtctctcttaccatgcttgcacttcttgttgtgttgctttctc 120
Query: 233 agaaccttgtgatcattcctgtaatgtcctctactgttggagagcagaagaactattaca 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaccttgtgatcattcctgtaatgtcctctactgttggagagcagaagaactattaca 180
Query: 293 ctccagatccacatgctgggactcctcccacaggtttctctgattctctatgctcacaca 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccagatccacatgctgggactcctcccacaggtttctctgattctctatgctcacaca 240
Query: 353 agagtcctcctccatctcctcatcatggctctggaggtggccatggaagcactccaccct 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagtcctcctccatctcctcatcatggctctggaggtggccatggaagcactccaccct 300
Query: 413 cacatggaggaggtggaggttactacaacccaccttcatcaccatcaccacccaaaggtg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacatggaggaggtggaggttactacaacccaccttcatcaccatcaccacccaaaggtg 360
Query: 473 gaaactgtggatcttcacccccacatgacccttctact 510
||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaactgtggatcttcacccccacatgacccttctact 398
>gnl|LJGI|TC69203
Length = 623
Score = 498 bits (251), Expect = e-140
Identities = 251/251 (100%)
Strand = Plus / Plus
Query: 785 tcactggcacatgcaactactggagcactcacccaggaatcatttggggaatccttggct 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tcactggcacatgcaactactggagcactcacccaggaatcatttggggaatccttggct 161
Query: 845 ggtggggaaatttagggagtgcatttggtgtgaccaatgctccagggtttggtgctggta 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ggtggggaaatttagggagtgcatttggtgtgaccaatgctccagggtttggtgctggta 221
Query: 905 tcagcttgcctcaagcactttccaacacaagaagtgatgggctaggagcactctacagag 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tcagcttgcctcaagcactttccaacacaagaagtgatgggctaggagcactctacagag 281
Query: 965 aaggcacagcttcctatctcaactccttggtcaacagcaagttccccttcacaaccaacc 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaggcacagcttcctatctcaactccttggtcaacagcaagttccccttcacaaccaacc 341
Query: 1025 aagtcagggaa 1035
|||||||||||
Sbjct: 342 aagtcagggaa 352
>gnl|LJGI|AV407566 weakly similar to UniRef100_A7PJX8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 321
Score = 460 bits (232), Expect = e-129
Identities = 232/232 (100%)
Strand = Plus / Plus
Query: 113 ctctcaaccctcttctctgttctatctcttggtgttcttcccagaagctagacacaatgc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctctcaaccctcttctctgttctatctcttggtgttcttcccagaagctagacacaatgc 60
Query: 173 agagcaaaagaagccatgtctctcttaccatgcttgcacttcttgttgtgttgctttctc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagcaaaagaagccatgtctctcttaccatgcttgcacttcttgttgtgttgctttctc 120
Query: 233 agaaccttgtgatcattcctgtaatgtcctctactgttggagagcagaagaactattaca 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaccttgtgatcattcctgtaatgtcctctactgttggagagcagaagaactattaca 180
Query: 293 ctccagatccacatgctgggactcctcccacaggtttctctgattctctatg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctccagatccacatgctgggactcctcccacaggtttctctgattctctatg 232
>gnl|LJGI|TC65717 similar to UniRef100_A7RPE6 Cluster: Predicted protein; n=1;
Nematostella vectensis|Rep: Predicted protein -
Nematostella vectensis (Starlet sea anemone), partial
(4%)
Length = 964
Score = 212 bits (107), Expect = 3e-54
Identities = 212/247 (85%)
Strand = Plus / Plus
Query: 785 tcactggcacatgcaactactggagcactcacccaggaatcatttggggaatccttggct 844
||||||| |||||||||||||||| |||||||||||||||||||||||| | || || |
Sbjct: 461 tcactggtacatgcaactactggaatactcacccaggaatcatttggggattgctaggtt 520
Query: 845 ggtggggaaatttagggagtgcatttggtgtgaccaatgctccagggtttggtgctggta 904
||||||||| ||||| | | ||||||||| | | |||||||| |||||| |||
Sbjct: 521 ggtggggaaccttaggcaatacatttggtgcatctagctttccagggtatggtgccggtc 580
Query: 905 tcagcttgcctcaagcactttccaacacaagaagtgatgggctaggagcactctacagag 964
|||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 581 tcagcttgccacaagcactttccaacacaagaactgatgggcttggagcactctacagag 640
Query: 965 aaggcacagcttcctatctcaactccttggtcaacagcaagttccccttcacaaccaacc 1024
|||| ||||||||||||||||||||||||| |||| |||||||| | ||||||| | |
Sbjct: 641 aaggagcagcttcctatctcaactccttggtgaacaagaagttcccttacacaacccagc 700
Query: 1025 aagtcag 1031
|||||||
Sbjct: 701 aagtcag 707
>gnl|LJGI|TC79544
Length = 334
Score = 60.0 bits (30), Expect = 3e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 277 cagaagaactattacactccagatccacatgctgggactcctcccacagg 326
||||| ||||||||||||||||| ||| ||||||| ||||||||| ||||
Sbjct: 146 cagaaaaactattacactccagacccaaatgctggaactcctccctcagg 195