Miyakogusa Predicted Gene

Lj0g3v0271699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0271699.1 Non Chatacterized Hit- tr|I1M6X0|I1M6X0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57246
PE,34.72,0.000000000000003,coiled-coil,NULL; seg,NULL,CUFF.17961.1
         (517 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS332667 similar to UniRef100_Q9IBR4 Cluster: ORF2 orf1...   172   1e-42

>gnl|LJGI|FS332667 similar to UniRef100_Q9IBR4 Cluster: ORF2 orf1629; n=1; Spodoptera
           exigua MNPV|Rep: ORF2 orf1629 - Spodoptera exigua MNPV,
           partial (6%)
          Length = 710

 Score =  172 bits (87), Expect = 1e-42
 Identities = 99/103 (96%)
 Strand = Plus / Plus

                                                                       
Query: 187 caggggaacacggagaaggagatgaaggtgagggaactggagcggatgttaggggtagtt 246
           |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 362 caggggaacacggagaaggagacgaaggtgagggaactggagcgaatgttaggggtagtt 421

                                                      
Query: 247 caaatgacggaggtggaggagcggagcaagagggttagggcgg 289
           || |||||| |||||||||||||||||||||||||||||||||
Sbjct: 422 cagatgacgaaggtggaggagcggagcaagagggttagggcgg 464



 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                 
Query: 55  aaggatgaccagatcaagaccctcaaggcggagatcgagcggttacgtgacggc 108
           ||||||||||||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 230 aaggatgaccagatcaagaccttgaaggcggagatcgagcggttgcgtgacggc 283