Miyakogusa Predicted Gene

Lj0g3v0271589.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0271589.1 CUFF.17951.1
         (348 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82733 UniRef100_Q9SLR6 Cluster: AHM1; n=1; Triticum a...   297   2e-80
gnl|LJGI|FS344951 weakly similar to UniRef100_Q708X5 Cluster: Le...    64   6e-10

>gnl|LJGI|TC82733 UniRef100_Q9SLR6 Cluster: AHM1; n=1; Triticum aestivum|Rep: AHM1 -
            Triticum aestivum (Wheat), partial (3%)
          Length = 1371

 Score =  297 bits (150), Expect = 2e-80
 Identities = 153/154 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgggtgaggttgctggtggtggcgaaaaattgaaactttggcagattaagaaggcgtgg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915  atgggtgaggttgctggtggtggcgaaaaattgaaactttggcagattaagaaggcgtgg 974

                                                                        
Query: 61   gaaatttttggtgatgggtggtggggtttgagttgcggagaaaggggagttttcagaatc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  gaaatttttggtgatgggtggtggggtttgagttgcggagaaaggggagttttcagaatc 1034

                                              
Query: 121  tggggtggggtttgtggatgtgggtatggtgggt 154
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1035 tggtgtggggtttgtggatgtgggtatggtgggt 1068



 Score =  190 bits (96), Expect = 4e-48
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                        
Query: 253  tttgtgtatgtttggtgggacggtgctttgatgaagatggtgtggttcttttatgatgtt 312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 tttgtgtatgtttggtgggacggtgctttgatgaagatggtgtggttcttttatgatgtt 1220

                                                
Query: 313  aatgtttttcttaatttggatttgggtgtgggatga 348
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1221 aatgtttttcttaatttggatttgggtgtgggatga 1256


>gnl|LJGI|FS344951 weakly similar to UniRef100_Q708X5 Cluster: Leucine rich repeat
           protein precursor; n=1; Cicer arietinum|Rep: Leucine
           rich repeat protein precursor - Cicer arietinum
           (Chickpea) (Garbanzo), partial (12%)
          Length = 759

 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 32/32 (100%)
 Strand = Plus / Minus

                                           
Query: 123 gggtggggtttgtggatgtgggtatggtgggt 154
           ||||||||||||||||||||||||||||||||
Sbjct: 153 gggtggggtttgtggatgtgggtatggtgggt 122