Miyakogusa Predicted Gene
- Lj0g3v0271549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0271549.1 tr|G7J375|G7J375_MEDTR Pre-mRNA splicing factor
ATP-dependent RNA helicase-like protein OS=Medicago ,78.82,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
RING/U-box,NULL; Eukaryotic typ,CUFF.18007.1
(4815 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77032 similar to UniRef100_A7R0H0 Cluster: Chromosome... 2032 0.0
>gnl|LJGI|TC77032 similar to UniRef100_A7R0H0 Cluster: Chromosome undetermined
scaffold_309, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_309, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(80%)
Length = 1364
Score = 2032 bits (1025), Expect = 0.0
Identities = 1105/1129 (97%), Gaps = 2/1129 (0%)
Strand = Plus / Plus
Query: 3689 ggagacctctggaagaactttccagagggaaaacaatagagcacaacagcctcacccctg 3748
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 ggagacctctggaagaactttccagagggaaaacaatagagcacaacagcctcaaccctg 60
Query: 3749 cagttctagagctcatgtgttccagagacggctgt-agtattagaagctcaatacagcaa 3807
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 61 cagttctagagctcatgtgttccagagacggctgtcagtcttagaagctcaatacagcaa 120
Query: 3808 gagacaggaacttacattctttttgacaggcacaaccagaatttacggatttttggttct 3867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagacaggaacttacattctttttgacaggcacaaccagaatttacggatttttggttct 180
Query: 3868 ccggacaagattgatctgg-ctcagcagaagctgattcaatccctactctctctccacga 3926
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccggataagattgatctgggctcagcagaagctgattcaatccctactctctctccacga 240
Query: 3927 aggaaggcagttggtaatccatctgagagggaaggatctacctccggacttaatgaagca 3986
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 aggaaggcagttggtaatccatctgagagggagggatctacctccggacttaatgaagca 300
Query: 3987 agtggttaagaattttgggccagatctccatggactaaagcagaaggtacctggggtaga 4046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtggttaagaattttgggccagatctccatggactaaagcagaaggtacctggggtaga 360
Query: 4047 tcttaacctcaacactcgcagccaacaaatatttcttcatggtaacaaggagttgaaacc 4106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcttaacctcaacactcgcagccaacaaatatttcttcatggtaacaaggagttgaaacc 420
Query: 4107 aagagtagaggaaacaattcttgagattgcacgttcaagtaatgatttggtcaagagaca 4166
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 aagagtagaggaagcaattcttgagattgcacgttcaagtaatgatttggttaagagaca 480
Query: 4167 tgacaccggacctagctgcccaatttgcttatgtgaagttgaggatggataccaacttga 4226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgacaccggacctagctgcccaatttgcttatgtgaagttgaggatggataccaacttga 540
Query: 4227 aggctgtggtcatttgttctgccgtttgtgtctcgtggagcaatgtgaatcagctataaa 4286
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 aggctgtggtcatttgttctgccgtttgtgtcttgtggagcaatgtgaatcagctataaa 600
Query: 4287 aaaccaaggaattttcccaatatgttgttctcaggagggctgtggagatcctattctgct 4346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaccaaggaattttcccaatatgttgttctcaggagggctgtggagatcctattctgct 660
Query: 4347 tacagatttgagatctttcttattaaatgataagctggaggaacttttcagggcttcttt 4406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacagatttgagatctttcttattaaatgataagctggaggaacttttcagggcttcttt 720
Query: 4407 gggtgcttttgtggtcgcgagtgggggaacttaccggttctgcccctctcctgactgccc 4466
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggtgcttttgtggttgcgagtgggggaacttaccggttctgcccctctcctgactgccc 780
Query: 4467 ctcaatttatcgagttgcggatccggacaccggtggtgagccctttgtttgtggggcgtg 4526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctcaatttatcgagttgcggatccggacaccggtggtgagccctttgtttgtggggcgtg 840
Query: 4527 ttattcagagacttgtaccaggtgccacttagagtatcatccatacctttcatgcgagag 4586
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 841 ttattcagagacttgtaccaggtgccatgtagagtatcatccatacctttcatgcgagag 900
Query: 4587 atacaaagaattcaagcaagatccagacttatctctgaaggagtggtgcaaagggaaaga 4646
||| |||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 901 atataaagaattcaaggaagatccggacttatctctgaaggagtggtgccaagggaaaga 960
Query: 4647 acaagttaagagctgttcggcctgcgggtatgtaattgagaaggtagatgggtgcaatca 4706
|| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct: 961 accagttaagagctgttcggcctgtgggtatgtaattgagaaggtagatggctgccatca 1020
Query: 4707 cgtcgagtgcaagtgtggaaagcatgtctgctgggtttgcttggagatcttcatgagcag 4766
||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1021 cgttgagtgccagtgtggaaagcatgtctgctgggtttgcttggagatctttttgagcag 1080
Query: 4767 tgatgaatgttataaccatttaagaactatacacttggccatcatctag 4815
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tgatgaatgttataaccatttaagaactatacacttggccatcatctag 1129